Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.12■□□□□ 0.97
CTSFQ9UBX1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.12■□□□□ 0.97
CTSFQ9UBX1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.12■□□□□ 0.97
CTSFQ9UBX1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.12■□□□□ 0.97
CTSFQ9UBX1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSFQ9UBX1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTSFQ9UBX1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CTSFQ9UBX1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.12■□□□□ 0.97
CTSFQ9UBX1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTSFQ9UBX1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSFQ9UBX1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CTSFQ9UBX1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSFQ9UBX1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.11■□□□□ 0.97
CTSFQ9UBX1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTSFQ9UBX1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.11■□□□□ 0.97
CTSFQ9UBX1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTSFQ9UBX1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CTSFQ9UBX1 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.11■□□□□ 0.97
CTSFQ9UBX1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CTSFQ9UBX1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTSFQ9UBX1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSFQ9UBX1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTSFQ9UBX1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSFQ9UBX1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTSFQ9UBX1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.1■□□□□ 0.97
CTSFQ9UBX1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTSFQ9UBX1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTSFQ9UBX1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSFQ9UBX1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CTSFQ9UBX1 AC091305.1-201ENST00000479476 895 ntBASIC21.1■□□□□ 0.97
CTSFQ9UBX1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.1■□□□□ 0.97
CTSFQ9UBX1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.1■□□□□ 0.97
CTSFQ9UBX1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSFQ9UBX1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSFQ9UBX1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTSFQ9UBX1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.1■□□□□ 0.97
CTSFQ9UBX1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CTSFQ9UBX1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSFQ9UBX1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.09■□□□□ 0.97
CTSFQ9UBX1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CTSFQ9UBX1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSFQ9UBX1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.09■□□□□ 0.97
CTSFQ9UBX1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.09■□□□□ 0.97
CTSFQ9UBX1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.09■□□□□ 0.97
CTSFQ9UBX1 AC027682.1-201ENST00000562846 899 ntBASIC21.09■□□□□ 0.97
CTSFQ9UBX1 AC008764.7-201ENST00000593779 1081 ntBASIC21.09■□□□□ 0.97
CTSFQ9UBX1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSFQ9UBX1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CTSFQ9UBX1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSFQ9UBX1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTSFQ9UBX1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTSFQ9UBX1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTSFQ9UBX1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTSFQ9UBX1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
CTSFQ9UBX1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.08■□□□□ 0.97
CTSFQ9UBX1 AC105265.2-201ENST00000467189 838 ntBASIC21.08■□□□□ 0.97
CTSFQ9UBX1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.08■□□□□ 0.97
CTSFQ9UBX1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CTSFQ9UBX1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTSFQ9UBX1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.08■□□□□ 0.96
CTSFQ9UBX1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
CTSFQ9UBX1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CTSFQ9UBX1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.08■□□□□ 0.96
CTSFQ9UBX1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTSFQ9UBX1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTSFQ9UBX1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CTSFQ9UBX1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CTSFQ9UBX1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTSFQ9UBX1 AC144652.1-201ENST00000609974 1624 ntBASIC21.07■□□□□ 0.96
CTSFQ9UBX1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CTSFQ9UBX1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.06■□□□□ 0.96
CTSFQ9UBX1 AC099791.1-201ENST00000416440 715 ntBASIC21.06■□□□□ 0.96
CTSFQ9UBX1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.06■□□□□ 0.96
CTSFQ9UBX1 CA15P2-201ENST00000611168 834 ntBASIC21.06■□□□□ 0.96
CTSFQ9UBX1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSFQ9UBX1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSFQ9UBX1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSFQ9UBX1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CTSFQ9UBX1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTSFQ9UBX1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSFQ9UBX1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSFQ9UBX1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSFQ9UBX1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTSFQ9UBX1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSFQ9UBX1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSFQ9UBX1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSFQ9UBX1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTSFQ9UBX1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTSFQ9UBX1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.05■□□□□ 0.96
CTSFQ9UBX1 RASA4CP-201ENST00000424092 1398 ntBASIC21.05■□□□□ 0.96
CTSFQ9UBX1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.05■□□□□ 0.96
CTSFQ9UBX1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTSFQ9UBX1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSFQ9UBX1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSFQ9UBX1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.05■□□□□ 0.96
CTSFQ9UBX1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTSFQ9UBX1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSFQ9UBX1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSFQ9UBX1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.04■□□□□ 0.96
CTSFQ9UBX1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms