Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3Q9UBI1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.66■□□□□ 0.74
COMMD3Q9UBI1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.66■□□□□ 0.74
COMMD3Q9UBI1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3Q9UBI1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3Q9UBI1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COMMD3Q9UBI1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3Q9UBI1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COMMD3Q9UBI1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COMMD3Q9UBI1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
COMMD3Q9UBI1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3Q9UBI1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COMMD3Q9UBI1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COMMD3Q9UBI1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
COMMD3Q9UBI1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.65■□□□□ 0.74
COMMD3Q9UBI1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3Q9UBI1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3Q9UBI1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.65■□□□□ 0.74
COMMD3Q9UBI1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3Q9UBI1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3Q9UBI1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
COMMD3Q9UBI1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3Q9UBI1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COMMD3Q9UBI1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
COMMD3Q9UBI1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COMMD3Q9UBI1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COMMD3Q9UBI1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD3Q9UBI1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
COMMD3Q9UBI1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD3Q9UBI1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD3Q9UBI1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD3Q9UBI1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD3Q9UBI1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.64■□□□□ 0.73
COMMD3Q9UBI1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COMMD3Q9UBI1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
COMMD3Q9UBI1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3Q9UBI1 AC139530.1-201ENST00000575312 1977 ntBASIC19.63■□□□□ 0.73
COMMD3Q9UBI1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3Q9UBI1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COMMD3Q9UBI1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3Q9UBI1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3Q9UBI1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.63■□□□□ 0.73
COMMD3Q9UBI1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3Q9UBI1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COMMD3Q9UBI1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.63■□□□□ 0.73
COMMD3Q9UBI1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3Q9UBI1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3Q9UBI1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3Q9UBI1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3Q9UBI1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COMMD3Q9UBI1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
COMMD3Q9UBI1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.61■□□□□ 0.73
COMMD3Q9UBI1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3Q9UBI1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3Q9UBI1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.6■□□□□ 0.73
COMMD3Q9UBI1 KRT18P10-201ENST00000388836 1287 ntBASIC19.6■□□□□ 0.73
COMMD3Q9UBI1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3Q9UBI1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COMMD3Q9UBI1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.6■□□□□ 0.73
COMMD3Q9UBI1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COMMD3Q9UBI1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COMMD3Q9UBI1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3Q9UBI1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3Q9UBI1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3Q9UBI1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
COMMD3Q9UBI1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms