Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.21■■□□□ 1.47
RC3H2Q9HBD1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RC3H2Q9HBD1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
RC3H2Q9HBD1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RC3H2Q9HBD1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RC3H2Q9HBD1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RC3H2Q9HBD1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.2■■□□□ 1.47
RC3H2Q9HBD1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
RC3H2Q9HBD1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
RC3H2Q9HBD1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
RC3H2Q9HBD1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RC3H2Q9HBD1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RC3H2Q9HBD1 AC004911.1-201ENST00000416316 871 ntBASIC24.2■■□□□ 1.46
RC3H2Q9HBD1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.2■■□□□ 1.46
RC3H2Q9HBD1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
RC3H2Q9HBD1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RC3H2Q9HBD1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RC3H2Q9HBD1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.2■■□□□ 1.46
RC3H2Q9HBD1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.2■■□□□ 1.46
RC3H2Q9HBD1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
RC3H2Q9HBD1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
RC3H2Q9HBD1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.19■■□□□ 1.46
RC3H2Q9HBD1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RC3H2Q9HBD1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.19■■□□□ 1.46
RC3H2Q9HBD1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.19■■□□□ 1.46
RC3H2Q9HBD1 KRT18P14-201ENST00000534205 1250 ntBASIC24.19■■□□□ 1.46
RC3H2Q9HBD1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
RC3H2Q9HBD1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RC3H2Q9HBD1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
RC3H2Q9HBD1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.19■■□□□ 1.46
RC3H2Q9HBD1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.19■■□□□ 1.46
RC3H2Q9HBD1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RC3H2Q9HBD1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.18■■□□□ 1.46
RC3H2Q9HBD1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.18■■□□□ 1.46
RC3H2Q9HBD1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
RC3H2Q9HBD1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RC3H2Q9HBD1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
RC3H2Q9HBD1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
RC3H2Q9HBD1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
RC3H2Q9HBD1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RC3H2Q9HBD1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.17■■□□□ 1.46
RC3H2Q9HBD1 NTF6G-201ENST00000591094 616 ntBASIC24.17■■□□□ 1.46
RC3H2Q9HBD1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.17■■□□□ 1.46
RC3H2Q9HBD1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RC3H2Q9HBD1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RC3H2Q9HBD1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RC3H2Q9HBD1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RC3H2Q9HBD1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.16■■□□□ 1.46
RC3H2Q9HBD1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RC3H2Q9HBD1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.16■■□□□ 1.46
RC3H2Q9HBD1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.16■■□□□ 1.46
RC3H2Q9HBD1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RC3H2Q9HBD1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.16■■□□□ 1.46
RC3H2Q9HBD1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RC3H2Q9HBD1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
RC3H2Q9HBD1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.15■■□□□ 1.46
RC3H2Q9HBD1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RC3H2Q9HBD1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
RC3H2Q9HBD1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RC3H2Q9HBD1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.15■■□□□ 1.46
RC3H2Q9HBD1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RC3H2Q9HBD1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.15■■□□□ 1.46
RC3H2Q9HBD1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RC3H2Q9HBD1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
RC3H2Q9HBD1 DUX4L4-201ENST00000566884 1269 ntBASIC24.14■■□□□ 1.45
RC3H2Q9HBD1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.14■■□□□ 1.45
RC3H2Q9HBD1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
RC3H2Q9HBD1 LINC02228-203ENST00000641970 1355 ntBASIC24.14■■□□□ 1.45
RC3H2Q9HBD1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.14■■□□□ 1.45
RC3H2Q9HBD1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RC3H2Q9HBD1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.14■■□□□ 1.45
RC3H2Q9HBD1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RC3H2Q9HBD1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RC3H2Q9HBD1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RC3H2Q9HBD1 ID1-201ENST00000376105 1233 ntBASIC24.13■■□□□ 1.45
RC3H2Q9HBD1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.13■■□□□ 1.45
RC3H2Q9HBD1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
RC3H2Q9HBD1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RC3H2Q9HBD1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.12■■□□□ 1.45
RC3H2Q9HBD1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
RC3H2Q9HBD1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.12■■□□□ 1.45
RC3H2Q9HBD1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.12■■□□□ 1.45
RC3H2Q9HBD1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.12■■□□□ 1.45
RC3H2Q9HBD1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RC3H2Q9HBD1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.12■■□□□ 1.45
RC3H2Q9HBD1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H2Q9HBD1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H2Q9HBD1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
RC3H2Q9HBD1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H2Q9HBD1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H2Q9HBD1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H2Q9HBD1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H2Q9HBD1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H2Q9HBD1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H2Q9HBD1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H2Q9HBD1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.11■■□□□ 1.45
RC3H2Q9HBD1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H2Q9HBD1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RC3H2Q9HBD1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.11■■□□□ 1.45
RC3H2Q9HBD1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms