Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.88■□□□□ 0.61
HDHD3Q9BSH5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HDHD3Q9BSH5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.88■□□□□ 0.61
HDHD3Q9BSH5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
HDHD3Q9BSH5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 AC004987.1-201ENST00000428627 508 ntBASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 THA1P-201ENST00000590384 1145 ntBASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.86■□□□□ 0.61
HDHD3Q9BSH5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HDHD3Q9BSH5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDHD3Q9BSH5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDHD3Q9BSH5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.85■□□□□ 0.61
HDHD3Q9BSH5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDHD3Q9BSH5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.85■□□□□ 0.61
HDHD3Q9BSH5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDHD3Q9BSH5 AC010980.1-201ENST00000587192 1142 ntBASIC18.85■□□□□ 0.61
HDHD3Q9BSH5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDHD3Q9BSH5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
HDHD3Q9BSH5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDHD3Q9BSH5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDHD3Q9BSH5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HDHD3Q9BSH5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HDHD3Q9BSH5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.85■□□□□ 0.61
HDHD3Q9BSH5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDHD3Q9BSH5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDHD3Q9BSH5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDHD3Q9BSH5 ATP5G2P3-201ENST00000429083 425 ntBASIC18.84■□□□□ 0.61
HDHD3Q9BSH5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.84■□□□□ 0.61
HDHD3Q9BSH5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.84■□□□□ 0.61
HDHD3Q9BSH5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HDHD3Q9BSH5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HDHD3Q9BSH5 AL353803.4-201ENST00000565882 1934 ntBASIC18.84■□□□□ 0.61
HDHD3Q9BSH5 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.83■□□□□ 0.61
HDHD3Q9BSH5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.83■□□□□ 0.61
HDHD3Q9BSH5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.83■□□□□ 0.61
HDHD3Q9BSH5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HDHD3Q9BSH5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
HDHD3Q9BSH5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HDHD3Q9BSH5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HDHD3Q9BSH5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HDHD3Q9BSH5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.83■□□□□ 0.6
HDHD3Q9BSH5 AC004448.1-201ENST00000458332 883 ntBASIC18.83■□□□□ 0.6
HDHD3Q9BSH5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.83■□□□□ 0.6
HDHD3Q9BSH5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.83■□□□□ 0.6
HDHD3Q9BSH5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HDHD3Q9BSH5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HDHD3Q9BSH5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HDHD3Q9BSH5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HDHD3Q9BSH5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.82■□□□□ 0.6
HDHD3Q9BSH5 KRT18P24-201ENST00000344739 1156 ntBASIC18.82■□□□□ 0.6
HDHD3Q9BSH5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.82■□□□□ 0.6
HDHD3Q9BSH5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.82■□□□□ 0.6
HDHD3Q9BSH5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HDHD3Q9BSH5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HDHD3Q9BSH5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HDHD3Q9BSH5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HDHD3Q9BSH5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HDHD3Q9BSH5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HDHD3Q9BSH5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HDHD3Q9BSH5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.82■□□□□ 0.6
HDHD3Q9BSH5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HDHD3Q9BSH5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HDHD3Q9BSH5 AC127496.7-201ENST00000625110 1798 ntBASIC18.81■□□□□ 0.6
HDHD3Q9BSH5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HDHD3Q9BSH5 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms