Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USB1Q9BQ65 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USB1Q9BQ65 UNC93B3-201ENST00000308076 687 ntBASIC19.82■□□□□ 0.76
USB1Q9BQ65 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.82■□□□□ 0.76
USB1Q9BQ65 PBX2P1-201ENST00000493219 1291 ntBASIC19.82■□□□□ 0.76
USB1Q9BQ65 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USB1Q9BQ65 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.82■□□□□ 0.76
USB1Q9BQ65 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.82■□□□□ 0.76
USB1Q9BQ65 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USB1Q9BQ65 SYT6-210ENST00000641643 1587 ntBASIC19.82■□□□□ 0.76
USB1Q9BQ65 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USB1Q9BQ65 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.82■□□□□ 0.76
USB1Q9BQ65 AC135279.3-201ENST00000610945 1311 ntBASIC19.81■□□□□ 0.76
USB1Q9BQ65 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USB1Q9BQ65 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USB1Q9BQ65 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USB1Q9BQ65 EDA-201ENST00000338901 1233 ntBASIC19.81■□□□□ 0.76
USB1Q9BQ65 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.81■□□□□ 0.76
USB1Q9BQ65 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
USB1Q9BQ65 AL136162.1-201ENST00000607711 1078 ntBASIC19.81■□□□□ 0.76
USB1Q9BQ65 AC005837.3-201ENST00000612163 286 ntBASIC19.81■□□□□ 0.76
USB1Q9BQ65 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USB1Q9BQ65 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USB1Q9BQ65 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USB1Q9BQ65 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.81■□□□□ 0.76
USB1Q9BQ65 C17orf82-201ENST00000623772 1530 ntBASIC19.81■□□□□ 0.76
USB1Q9BQ65 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USB1Q9BQ65 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
USB1Q9BQ65 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USB1Q9BQ65 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USB1Q9BQ65 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
USB1Q9BQ65 AC141586.4-201ENST00000624558 1573 ntBASIC19.8■□□□□ 0.76
USB1Q9BQ65 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.8■□□□□ 0.76
USB1Q9BQ65 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.8■□□□□ 0.76
USB1Q9BQ65 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USB1Q9BQ65 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
USB1Q9BQ65 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
USB1Q9BQ65 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USB1Q9BQ65 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.8■□□□□ 0.76
USB1Q9BQ65 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.8■□□□□ 0.76
USB1Q9BQ65 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USB1Q9BQ65 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
USB1Q9BQ65 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
USB1Q9BQ65 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USB1Q9BQ65 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USB1Q9BQ65 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
USB1Q9BQ65 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USB1Q9BQ65 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.78■□□□□ 0.76
USB1Q9BQ65 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.78■□□□□ 0.76
USB1Q9BQ65 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.78■□□□□ 0.76
USB1Q9BQ65 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USB1Q9BQ65 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USB1Q9BQ65 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.78■□□□□ 0.76
USB1Q9BQ65 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
USB1Q9BQ65 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
USB1Q9BQ65 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.77■□□□□ 0.76
USB1Q9BQ65 AC011298.3-201ENST00000615796 283 ntBASIC19.77■□□□□ 0.76
USB1Q9BQ65 AL355001.2-201ENST00000620617 1191 ntBASIC19.77■□□□□ 0.76
USB1Q9BQ65 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.77■□□□□ 0.76
USB1Q9BQ65 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USB1Q9BQ65 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.77■□□□□ 0.76
USB1Q9BQ65 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USB1Q9BQ65 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
USB1Q9BQ65 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USB1Q9BQ65 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USB1Q9BQ65 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.76■□□□□ 0.75
USB1Q9BQ65 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USB1Q9BQ65 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USB1Q9BQ65 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
USB1Q9BQ65 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.76■□□□□ 0.75
USB1Q9BQ65 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USB1Q9BQ65 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.76■□□□□ 0.75
USB1Q9BQ65 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
USB1Q9BQ65 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USB1Q9BQ65 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
USB1Q9BQ65 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
USB1Q9BQ65 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USB1Q9BQ65 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.76■□□□□ 0.75
USB1Q9BQ65 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USB1Q9BQ65 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
USB1Q9BQ65 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.76■□□□□ 0.75
USB1Q9BQ65 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USB1Q9BQ65 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USB1Q9BQ65 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USB1Q9BQ65 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.76■□□□□ 0.75
USB1Q9BQ65 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USB1Q9BQ65 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.75■□□□□ 0.75
USB1Q9BQ65 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.75■□□□□ 0.75
USB1Q9BQ65 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.75■□□□□ 0.75
USB1Q9BQ65 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USB1Q9BQ65 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
USB1Q9BQ65 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
USB1Q9BQ65 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
USB1Q9BQ65 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.75■□□□□ 0.75
USB1Q9BQ65 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
USB1Q9BQ65 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USB1Q9BQ65 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
USB1Q9BQ65 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USB1Q9BQ65 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USB1Q9BQ65 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms