Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NEK1Q96PY6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.56■■□□□ 1.84
NEK1Q96PY6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NEK1Q96PY6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.55■■□□□ 1.84
NEK1Q96PY6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NEK1Q96PY6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NEK1Q96PY6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NEK1Q96PY6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NEK1Q96PY6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.55■■□□□ 1.84
NEK1Q96PY6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.55■■□□□ 1.84
NEK1Q96PY6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NEK1Q96PY6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NEK1Q96PY6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
NEK1Q96PY6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
NEK1Q96PY6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
NEK1Q96PY6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
NEK1Q96PY6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NEK1Q96PY6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NEK1Q96PY6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
NEK1Q96PY6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
NEK1Q96PY6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NEK1Q96PY6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.53■■□□□ 1.84
NEK1Q96PY6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
NEK1Q96PY6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NEK1Q96PY6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NEK1Q96PY6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NEK1Q96PY6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NEK1Q96PY6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NEK1Q96PY6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
NEK1Q96PY6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
NEK1Q96PY6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NEK1Q96PY6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
NEK1Q96PY6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
NEK1Q96PY6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
NEK1Q96PY6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NEK1Q96PY6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NEK1Q96PY6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.52■■□□□ 1.84
NEK1Q96PY6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
NEK1Q96PY6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
NEK1Q96PY6 AC012676.1-201ENST00000574705 1949 ntBASIC26.52■■□□□ 1.84
NEK1Q96PY6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
NEK1Q96PY6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
NEK1Q96PY6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
NEK1Q96PY6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.51■■□□□ 1.83
NEK1Q96PY6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.51■■□□□ 1.83
NEK1Q96PY6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NEK1Q96PY6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
NEK1Q96PY6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
NEK1Q96PY6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.51■■□□□ 1.83
NEK1Q96PY6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
NEK1Q96PY6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.5■■□□□ 1.83
NEK1Q96PY6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.5■■□□□ 1.83
NEK1Q96PY6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NEK1Q96PY6 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.5■■□□□ 1.83
NEK1Q96PY6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
NEK1Q96PY6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.5■■□□□ 1.83
NEK1Q96PY6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
NEK1Q96PY6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.5■■□□□ 1.83
NEK1Q96PY6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NEK1Q96PY6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
NEK1Q96PY6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
NEK1Q96PY6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.49■■□□□ 1.83
NEK1Q96PY6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NEK1Q96PY6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NEK1Q96PY6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NEK1Q96PY6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.49■■□□□ 1.83
NEK1Q96PY6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.49■■□□□ 1.83
NEK1Q96PY6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.49■■□□□ 1.83
NEK1Q96PY6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NEK1Q96PY6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
NEK1Q96PY6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NEK1Q96PY6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NEK1Q96PY6 FP325331.1-202ENST00000623531 1380 ntBASIC26.48■■□□□ 1.83
NEK1Q96PY6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NEK1Q96PY6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.48■■□□□ 1.83
NEK1Q96PY6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
NEK1Q96PY6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.48■■□□□ 1.83
NEK1Q96PY6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.48■■□□□ 1.83
NEK1Q96PY6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.48■■□□□ 1.83
NEK1Q96PY6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.48■■□□□ 1.83
NEK1Q96PY6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.48■■□□□ 1.83
NEK1Q96PY6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
NEK1Q96PY6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NEK1Q96PY6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.48■■□□□ 1.83
NEK1Q96PY6 LINC01529-204ENST00000636474 1715 ntBASIC26.48■■□□□ 1.83
NEK1Q96PY6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NEK1Q96PY6 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.47■■□□□ 1.83
NEK1Q96PY6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
NEK1Q96PY6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NEK1Q96PY6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NEK1Q96PY6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
NEK1Q96PY6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.46■■□□□ 1.83
NEK1Q96PY6 C17orf82-201ENST00000623772 1530 ntBASIC26.46■■□□□ 1.83
NEK1Q96PY6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NEK1Q96PY6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
NEK1Q96PY6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NEK1Q96PY6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.46■■□□□ 1.83
NEK1Q96PY6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
NEK1Q96PY6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NEK1Q96PY6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC26.45■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms