Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.16■□□□□ 0.66
SPG11Q96JI7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.16■□□□□ 0.66
SPG11Q96JI7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.16■□□□□ 0.66
SPG11Q96JI7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.16■□□□□ 0.66
SPG11Q96JI7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPG11Q96JI7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SPG11Q96JI7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SPG11Q96JI7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.16■□□□□ 0.66
SPG11Q96JI7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPG11Q96JI7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPG11Q96JI7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPG11Q96JI7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPG11Q96JI7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.16■□□□□ 0.66
SPG11Q96JI7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.15■□□□□ 0.66
SPG11Q96JI7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPG11Q96JI7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
SPG11Q96JI7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.15■□□□□ 0.66
SPG11Q96JI7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPG11Q96JI7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.15■□□□□ 0.66
SPG11Q96JI7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.15■□□□□ 0.66
SPG11Q96JI7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SPG11Q96JI7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SPG11Q96JI7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SPG11Q96JI7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SPG11Q96JI7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SPG11Q96JI7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SPG11Q96JI7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
SPG11Q96JI7 AC142086.6-201ENST00000621154 1765 ntBASIC19.15■□□□□ 0.66
SPG11Q96JI7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SPG11Q96JI7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SPG11Q96JI7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.15■□□□□ 0.66
SPG11Q96JI7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SPG11Q96JI7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SPG11Q96JI7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SPG11Q96JI7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SPG11Q96JI7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.14■□□□□ 0.66
SPG11Q96JI7 AP005435.1-201ENST00000529293 1178 ntBASIC19.14■□□□□ 0.66
SPG11Q96JI7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.14■□□□□ 0.66
SPG11Q96JI7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPG11Q96JI7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SPG11Q96JI7 NCF1B-203ENST00000435988 1254 ntBASIC19.14■□□□□ 0.65
SPG11Q96JI7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.14■□□□□ 0.65
SPG11Q96JI7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.14■□□□□ 0.65
SPG11Q96JI7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SPG11Q96JI7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SPG11Q96JI7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.13■□□□□ 0.65
SPG11Q96JI7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPG11Q96JI7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.13■□□□□ 0.65
SPG11Q96JI7 AC004854.2-201ENST00000608450 1441 ntBASIC19.13■□□□□ 0.65
SPG11Q96JI7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPG11Q96JI7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPG11Q96JI7 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.13■□□□□ 0.65
SPG11Q96JI7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.13■□□□□ 0.65
SPG11Q96JI7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.13■□□□□ 0.65
SPG11Q96JI7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPG11Q96JI7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPG11Q96JI7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPG11Q96JI7 AC093827.2-201ENST00000512654 315 ntBASIC19.12■□□□□ 0.65
SPG11Q96JI7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPG11Q96JI7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.12■□□□□ 0.65
SPG11Q96JI7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.12■□□□□ 0.65
SPG11Q96JI7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.12■□□□□ 0.65
SPG11Q96JI7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.12■□□□□ 0.65
SPG11Q96JI7 TSPY20P-201ENST00000450910 630 ntBASIC19.12■□□□□ 0.65
SPG11Q96JI7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.12■□□□□ 0.65
SPG11Q96JI7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.12■□□□□ 0.65
SPG11Q96JI7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.12■□□□□ 0.65
SPG11Q96JI7 TMEM191A-211ENST00000637163 1067 ntBASIC19.12■□□□□ 0.65
SPG11Q96JI7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPG11Q96JI7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPG11Q96JI7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPG11Q96JI7 AC133637.1-201ENST00000624115 1537 ntBASIC19.11■□□□□ 0.65
SPG11Q96JI7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.11■□□□□ 0.65
SPG11Q96JI7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPG11Q96JI7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SPG11Q96JI7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPG11Q96JI7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SPG11Q96JI7 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.11■□□□□ 0.65
SPG11Q96JI7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
SPG11Q96JI7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SPG11Q96JI7 AC141586.4-201ENST00000624558 1573 ntBASIC19.11■□□□□ 0.65
SPG11Q96JI7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPG11Q96JI7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.11■□□□□ 0.65
SPG11Q96JI7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPG11Q96JI7 AC073111.5-205ENST00000641717 521 ntBASIC19.11■□□□□ 0.65
SPG11Q96JI7 AC092803.2-201ENST00000564287 1899 ntBASIC19.11■□□□□ 0.65
SPG11Q96JI7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPG11Q96JI7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SPG11Q96JI7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SPG11Q96JI7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SPG11Q96JI7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.1■□□□□ 0.65
SPG11Q96JI7 AC010525.1-201ENST00000585559 441 ntBASIC19.1■□□□□ 0.65
SPG11Q96JI7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SPG11Q96JI7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPG11Q96JI7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
SPG11Q96JI7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPG11Q96JI7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
SPG11Q96JI7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.1■□□□□ 0.65
SPG11Q96JI7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
SPG11Q96JI7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms