Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PTPRUQ92729 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PTPRUQ92729 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PTPRUQ92729 NT5C3AP1-201ENST00000394500 1012 ntBASIC31.79■■■□□ 2.68
PTPRUQ92729 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC31.79■■■□□ 2.68
PTPRUQ92729 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PTPRUQ92729 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC31.79■■■□□ 2.68
PTPRUQ92729 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC31.79■■■□□ 2.68
PTPRUQ92729 AC091060.1-201ENST00000623524 1766 ntBASIC31.79■■■□□ 2.68
PTPRUQ92729 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PTPRUQ92729 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PTPRUQ92729 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC31.78■■■□□ 2.68
PTPRUQ92729 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
PTPRUQ92729 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
PTPRUQ92729 CDCA4P2-201ENST00000441182 718 ntBASIC31.77■■■□□ 2.68
PTPRUQ92729 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PTPRUQ92729 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PTPRUQ92729 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
PTPRUQ92729 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PTPRUQ92729 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PTPRUQ92729 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC31.76■■■□□ 2.68
PTPRUQ92729 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
PTPRUQ92729 AC080038.1-201ENST00000611274 1154 ntBASIC31.76■■■□□ 2.68
PTPRUQ92729 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC31.76■■■□□ 2.68
PTPRUQ92729 LHPP-203ENST00000392757 840 ntTSL 3 BASIC31.75■■■□□ 2.67
PTPRUQ92729 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC31.75■■■□□ 2.67
PTPRUQ92729 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
PTPRUQ92729 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC31.75■■■□□ 2.67
PTPRUQ92729 AC073111.5-205ENST00000641717 521 ntBASIC31.75■■■□□ 2.67
PTPRUQ92729 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PTPRUQ92729 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC31.75■■■□□ 2.67
PTPRUQ92729 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PTPRUQ92729 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC31.75■■■□□ 2.67
PTPRUQ92729 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PTPRUQ92729 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC31.74■■■□□ 2.67
PTPRUQ92729 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC31.74■■■□□ 2.67
PTPRUQ92729 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PTPRUQ92729 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PTPRUQ92729 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PTPRUQ92729 AL121749.1-202ENST00000609313 2153 ntBASIC31.74■■■□□ 2.67
PTPRUQ92729 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PTPRUQ92729 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PTPRUQ92729 EMC9-206ENST00000560403 872 ntTSL 2 BASIC31.74■■■□□ 2.67
PTPRUQ92729 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
PTPRUQ92729 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
PTPRUQ92729 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC31.73■■■□□ 2.67
PTPRUQ92729 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC31.73■■■□□ 2.67
PTPRUQ92729 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PTPRUQ92729 AP005435.1-201ENST00000529293 1178 ntBASIC31.73■■■□□ 2.67
PTPRUQ92729 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC31.73■■■□□ 2.67
PTPRUQ92729 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PTPRUQ92729 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PTPRUQ92729 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PTPRUQ92729 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC31.72■■■□□ 2.67
PTPRUQ92729 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC31.72■■■□□ 2.67
PTPRUQ92729 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC31.72■■■□□ 2.67
PTPRUQ92729 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PTPRUQ92729 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PTPRUQ92729 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PTPRUQ92729 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
PTPRUQ92729 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC31.71■■■□□ 2.67
PTPRUQ92729 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
PTPRUQ92729 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
PTPRUQ92729 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC31.71■■■□□ 2.67
PTPRUQ92729 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC31.71■■■□□ 2.67
PTPRUQ92729 GXYLT1P5-201ENST00000614548 1189 ntBASIC31.71■■■□□ 2.67
PTPRUQ92729 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PTPRUQ92729 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PTPRUQ92729 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
PTPRUQ92729 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PTPRUQ92729 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.67
PTPRUQ92729 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC31.7■■■□□ 2.67
PTPRUQ92729 MPST-204ENST00000404393 1329 ntTSL 5 BASIC31.7■■■□□ 2.67
PTPRUQ92729 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC31.7■■■□□ 2.67
PTPRUQ92729 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
PTPRUQ92729 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC31.7■■■□□ 2.67
PTPRUQ92729 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC31.7■■■□□ 2.67
PTPRUQ92729 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PTPRUQ92729 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PTPRUQ92729 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC31.69■■■□□ 2.66
PTPRUQ92729 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
PTPRUQ92729 TPRG1LP1-201ENST00000598702 760 ntBASIC31.69■■■□□ 2.66
PTPRUQ92729 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PTPRUQ92729 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PTPRUQ92729 ABHD17AP1-201ENST00000358206 933 ntBASIC31.68■■■□□ 2.66
PTPRUQ92729 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC31.68■■■□□ 2.66
PTPRUQ92729 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
PTPRUQ92729 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
PTPRUQ92729 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC31.68■■■□□ 2.66
PTPRUQ92729 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PTPRUQ92729 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
PTPRUQ92729 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC31.68■■■□□ 2.66
PTPRUQ92729 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC31.68■■■□□ 2.66
PTPRUQ92729 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
PTPRUQ92729 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
PTPRUQ92729 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC31.67■■■□□ 2.66
PTPRUQ92729 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PTPRUQ92729 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC31.67■■■□□ 2.66
PTPRUQ92729 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC31.66■■■□□ 2.66
PTPRUQ92729 AC104771.1-201ENST00000603335 964 ntBASIC31.66■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms