Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 pRNA.11-201ENST00000618423 90 ntBASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 pRNA.13-201ENST00000619112 90 ntBASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYNE2Q8WXH0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 AC073648.6-201ENST00000641589 218 ntBASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 AC055733.4-201ENST00000638462 1354 ntBASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 AC007322.1-201ENST00000426983 750 ntBASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 AF201337.1-201ENST00000520239 748 ntBASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 AC012306.2-201ENST00000609350 630 ntBASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYNE2Q8WXH0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 KRT126P-201ENST00000549467 1181 ntBASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 ESRRAP1-201ENST00000400596 1257 ntBASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 AL359736.2-201ENST00000621992 437 ntBASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 MARS-234ENST00000630571 216 ntTSL 5 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 MARS-235ENST00000630803 183 ntTSL 3 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 UBE2SP1-201ENST00000450587 669 ntBASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC9.36□□□□□ -0.91
SYNE2Q8WXH0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SYNE2Q8WXH0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
SYNE2Q8WXH0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC9.35□□□□□ -0.91
SYNE2Q8WXH0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYNE2Q8WXH0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC9.35□□□□□ -0.91
SYNE2Q8WXH0 KRT19P1-201ENST00000405746 1186 ntBASIC9.35□□□□□ -0.91
SYNE2Q8WXH0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC9.35□□□□□ -0.91
SYNE2Q8WXH0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
SYNE2Q8WXH0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC9.35□□□□□ -0.91
SYNE2Q8WXH0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYNE2Q8WXH0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
SYNE2Q8WXH0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SYNE2Q8WXH0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
SYNE2Q8WXH0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SYNE2Q8WXH0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SYNE2Q8WXH0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SYNE2Q8WXH0 AC091060.1-201ENST00000623524 1766 ntBASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC9.34□□□□□ -0.91
SYNE2Q8WXH0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms