Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RPS4Y2Q8TD47 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4Y2Q8TD47 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4Y2Q8TD47 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4Y2Q8TD47 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPS4Y2Q8TD47 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RPS4Y2Q8TD47 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RPS4Y2Q8TD47 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RPS4Y2Q8TD47 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPS4Y2Q8TD47 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPS4Y2Q8TD47 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.64■□□□□ 0.73
RPS4Y2Q8TD47 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPS4Y2Q8TD47 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RPS4Y2Q8TD47 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.64■□□□□ 0.73
RPS4Y2Q8TD47 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPS4Y2Q8TD47 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPS4Y2Q8TD47 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPS4Y2Q8TD47 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4Y2Q8TD47 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4Y2Q8TD47 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RPS4Y2Q8TD47 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RPS4Y2Q8TD47 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.63■□□□□ 0.73
RPS4Y2Q8TD47 AF131216.4-201ENST00000638924 1588 ntBASIC19.63■□□□□ 0.73
RPS4Y2Q8TD47 KRT18P60-201ENST00000312876 1297 ntBASIC19.63■□□□□ 0.73
RPS4Y2Q8TD47 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4Y2Q8TD47 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4Y2Q8TD47 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.63■□□□□ 0.73
RPS4Y2Q8TD47 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.63■□□□□ 0.73
RPS4Y2Q8TD47 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4Y2Q8TD47 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
RPS4Y2Q8TD47 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPS4Y2Q8TD47 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPS4Y2Q8TD47 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4Y2Q8TD47 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4Y2Q8TD47 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.61■□□□□ 0.73
RPS4Y2Q8TD47 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4Y2Q8TD47 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4Y2Q8TD47 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.61■□□□□ 0.73
RPS4Y2Q8TD47 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.61■□□□□ 0.73
RPS4Y2Q8TD47 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPS4Y2Q8TD47 AL353803.4-201ENST00000565882 1934 ntBASIC19.61■□□□□ 0.73
RPS4Y2Q8TD47 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4Y2Q8TD47 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4Y2Q8TD47 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
RPS4Y2Q8TD47 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RPS4Y2Q8TD47 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.6■□□□□ 0.73
RPS4Y2Q8TD47 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.6■□□□□ 0.73
RPS4Y2Q8TD47 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.6■□□□□ 0.73
RPS4Y2Q8TD47 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4Y2Q8TD47 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.6■□□□□ 0.73
RPS4Y2Q8TD47 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RPS4Y2Q8TD47 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.6■□□□□ 0.73
RPS4Y2Q8TD47 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4Y2Q8TD47 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4Y2Q8TD47 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4Y2Q8TD47 AC092053.2-201ENST00000640557 1818 ntBASIC19.6■□□□□ 0.73
RPS4Y2Q8TD47 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPS4Y2Q8TD47 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 AC004448.1-201ENST00000458332 883 ntBASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.59■□□□□ 0.73
RPS4Y2Q8TD47 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPS4Y2Q8TD47 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPS4Y2Q8TD47 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.58■□□□□ 0.73
RPS4Y2Q8TD47 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.58■□□□□ 0.72
RPS4Y2Q8TD47 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.58■□□□□ 0.72
RPS4Y2Q8TD47 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.58■□□□□ 0.72
RPS4Y2Q8TD47 AC007375.3-201ENST00000600936 2314 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms