Protein–RNA interactions for Protein: Q8NHV9

RHOXF1, Rhox homeobox family member 1, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1Q8NHV9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RHOXF1Q8NHV9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.37■□□□□ 0.85
RHOXF1Q8NHV9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RHOXF1Q8NHV9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RHOXF1Q8NHV9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RHOXF1Q8NHV9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.37■□□□□ 0.85
RHOXF1Q8NHV9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RHOXF1Q8NHV9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RHOXF1Q8NHV9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RHOXF1Q8NHV9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RHOXF1Q8NHV9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RHOXF1Q8NHV9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RHOXF1Q8NHV9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RHOXF1Q8NHV9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RHOXF1Q8NHV9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RHOXF1Q8NHV9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RHOXF1Q8NHV9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RHOXF1Q8NHV9 AC131274.2-201ENST00000580697 1507 ntBASIC20.35■□□□□ 0.85
RHOXF1Q8NHV9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RHOXF1Q8NHV9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RHOXF1Q8NHV9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RHOXF1Q8NHV9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.35■□□□□ 0.85
RHOXF1Q8NHV9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RHOXF1Q8NHV9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RHOXF1Q8NHV9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RHOXF1Q8NHV9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RHOXF1Q8NHV9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RHOXF1Q8NHV9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.34■□□□□ 0.85
RHOXF1Q8NHV9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RHOXF1Q8NHV9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RHOXF1Q8NHV9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RHOXF1Q8NHV9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RHOXF1Q8NHV9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RHOXF1Q8NHV9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RHOXF1Q8NHV9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RHOXF1Q8NHV9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RHOXF1Q8NHV9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RHOXF1Q8NHV9 AC079630.1-202ENST00000618127 1840 ntBASIC20.34■□□□□ 0.85
RHOXF1Q8NHV9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.34■□□□□ 0.85
RHOXF1Q8NHV9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RHOXF1Q8NHV9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RHOXF1Q8NHV9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RHOXF1Q8NHV9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RHOXF1Q8NHV9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RHOXF1Q8NHV9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.33■□□□□ 0.85
RHOXF1Q8NHV9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.33■□□□□ 0.85
RHOXF1Q8NHV9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RHOXF1Q8NHV9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.33■□□□□ 0.85
RHOXF1Q8NHV9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RHOXF1Q8NHV9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.33■□□□□ 0.84
RHOXF1Q8NHV9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RHOXF1Q8NHV9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RHOXF1Q8NHV9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RHOXF1Q8NHV9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
RHOXF1Q8NHV9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF1Q8NHV9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
RHOXF1Q8NHV9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF1Q8NHV9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF1Q8NHV9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
RHOXF1Q8NHV9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF1Q8NHV9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF1Q8NHV9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF1Q8NHV9 AC009831.1-201ENST00000580420 1582 ntBASIC20.32■□□□□ 0.84
RHOXF1Q8NHV9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF1Q8NHV9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF1Q8NHV9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF1Q8NHV9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RHOXF1Q8NHV9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RHOXF1Q8NHV9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RHOXF1Q8NHV9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RHOXF1Q8NHV9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF1Q8NHV9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF1Q8NHV9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF1Q8NHV9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF1Q8NHV9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF1Q8NHV9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.3■□□□□ 0.84
RHOXF1Q8NHV9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.3■□□□□ 0.84
RHOXF1Q8NHV9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF1Q8NHV9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RHOXF1Q8NHV9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
RHOXF1Q8NHV9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.3■□□□□ 0.84
RHOXF1Q8NHV9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms