Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC12.37□□□□□ -0.43
SPTSSBQ8NFR3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPTSSBQ8NFR3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPTSSBQ8NFR3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SPTSSBQ8NFR3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPTSSBQ8NFR3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 AC100797.4-201ENST00000631653 1827 ntBASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SPTSSBQ8NFR3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SPTSSBQ8NFR3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 AP004609.3-201ENST00000610705 1884 ntBASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SPTSSBQ8NFR3 EP400NL-214ENST00000641289 2402 ntBASIC12.33□□□□□ -0.43
SPTSSBQ8NFR3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
SPTSSBQ8NFR3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPTSSBQ8NFR3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SPTSSBQ8NFR3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPTSSBQ8NFR3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SPTSSBQ8NFR3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC12.33□□□□□ -0.44
SPTSSBQ8NFR3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPTSSBQ8NFR3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
SPTSSBQ8NFR3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC12.33□□□□□ -0.44
SPTSSBQ8NFR3 AL139125.2-201ENST00000623134 1869 ntBASIC12.33□□□□□ -0.44
SPTSSBQ8NFR3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPTSSBQ8NFR3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPTSSBQ8NFR3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 AL137060.1-201ENST00000618151 2648 ntBASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SPTSSBQ8NFR3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms