Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.04■■□□□ 1.12
CCNYL1Q8N7R7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.04■■□□□ 1.12
CCNYL1Q8N7R7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNYL1Q8N7R7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNYL1Q8N7R7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCNYL1Q8N7R7 PVT1_1.1-201ENST00000615125 194 ntBASIC22.04■■□□□ 1.12
CCNYL1Q8N7R7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNYL1Q8N7R7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CCNYL1Q8N7R7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.04■■□□□ 1.12
CCNYL1Q8N7R7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCNYL1Q8N7R7 CLDN5-201ENST00000403084 2357 ntBASIC22.04■■□□□ 1.12
CCNYL1Q8N7R7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCNYL1Q8N7R7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CCNYL1Q8N7R7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCNYL1Q8N7R7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNYL1Q8N7R7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNYL1Q8N7R7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
CCNYL1Q8N7R7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNYL1Q8N7R7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNYL1Q8N7R7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
CCNYL1Q8N7R7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNYL1Q8N7R7 KRT18P24-201ENST00000344739 1156 ntBASIC22.03■■□□□ 1.12
CCNYL1Q8N7R7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.03■■□□□ 1.12
CCNYL1Q8N7R7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNYL1Q8N7R7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNYL1Q8N7R7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCNYL1Q8N7R7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCNYL1Q8N7R7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCNYL1Q8N7R7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.02■■□□□ 1.12
CCNYL1Q8N7R7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCNYL1Q8N7R7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCNYL1Q8N7R7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.02■■□□□ 1.12
CCNYL1Q8N7R7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.02■■□□□ 1.12
CCNYL1Q8N7R7 AC010980.1-201ENST00000587192 1142 ntBASIC22.02■■□□□ 1.12
CCNYL1Q8N7R7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CCNYL1Q8N7R7 AC074183.2-201ENST00000623112 922 ntBASIC22.02■■□□□ 1.12
CCNYL1Q8N7R7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CCNYL1Q8N7R7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.02■■□□□ 1.12
CCNYL1Q8N7R7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCNYL1Q8N7R7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCNYL1Q8N7R7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCNYL1Q8N7R7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
CCNYL1Q8N7R7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNYL1Q8N7R7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.01■■□□□ 1.11
CCNYL1Q8N7R7 LINC00526-201ENST00000581067 1875 ntBASIC22.01■■□□□ 1.11
CCNYL1Q8N7R7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNYL1Q8N7R7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.01■■□□□ 1.11
CCNYL1Q8N7R7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.01■■□□□ 1.11
CCNYL1Q8N7R7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCNYL1Q8N7R7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.01■■□□□ 1.11
CCNYL1Q8N7R7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.01■■□□□ 1.11
CCNYL1Q8N7R7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.01■■□□□ 1.11
CCNYL1Q8N7R7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CCNYL1Q8N7R7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CCNYL1Q8N7R7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22■■□□□ 1.11
CCNYL1Q8N7R7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCNYL1Q8N7R7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22■■□□□ 1.11
CCNYL1Q8N7R7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22■■□□□ 1.11
CCNYL1Q8N7R7 AC004448.1-201ENST00000458332 883 ntBASIC22■■□□□ 1.11
CCNYL1Q8N7R7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22■■□□□ 1.11
CCNYL1Q8N7R7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCNYL1Q8N7R7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22■■□□□ 1.11
CCNYL1Q8N7R7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCNYL1Q8N7R7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCNYL1Q8N7R7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCNYL1Q8N7R7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNYL1Q8N7R7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNYL1Q8N7R7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CCNYL1Q8N7R7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.99■■□□□ 1.11
CCNYL1Q8N7R7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNYL1Q8N7R7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
CCNYL1Q8N7R7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNYL1Q8N7R7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CCNYL1Q8N7R7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.98■■□□□ 1.11
CCNYL1Q8N7R7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.98■■□□□ 1.11
CCNYL1Q8N7R7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNYL1Q8N7R7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNYL1Q8N7R7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNYL1Q8N7R7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CCNYL1Q8N7R7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNYL1Q8N7R7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.98■■□□□ 1.11
CCNYL1Q8N7R7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCNYL1Q8N7R7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNYL1Q8N7R7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.97■■□□□ 1.11
CCNYL1Q8N7R7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CCNYL1Q8N7R7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNYL1Q8N7R7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCNYL1Q8N7R7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNYL1Q8N7R7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CCNYL1Q8N7R7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.97■■□□□ 1.11
CCNYL1Q8N7R7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNYL1Q8N7R7 ECEL1P1-201ENST00000373592 1742 ntBASIC21.97■■□□□ 1.11
CCNYL1Q8N7R7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNYL1Q8N7R7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNYL1Q8N7R7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNYL1Q8N7R7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNYL1Q8N7R7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNYL1Q8N7R7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CCNYL1Q8N7R7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNYL1Q8N7R7 TSPY13P-201ENST00000338964 914 ntBASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms