Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 SLC47A1P1-202ENST00000449666 945 ntBASIC23.66■■□□□ 1.38
TTC9BQ8N6N2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.66■■□□□ 1.38
TTC9BQ8N6N2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC9BQ8N6N2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TTC9BQ8N6N2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC9BQ8N6N2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC9BQ8N6N2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TTC9BQ8N6N2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC9BQ8N6N2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.65■■□□□ 1.38
TTC9BQ8N6N2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.65■■□□□ 1.38
TTC9BQ8N6N2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC9BQ8N6N2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.65■■□□□ 1.38
TTC9BQ8N6N2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TTC9BQ8N6N2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC9BQ8N6N2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC9BQ8N6N2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC9BQ8N6N2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TTC9BQ8N6N2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TTC9BQ8N6N2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
TTC9BQ8N6N2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TTC9BQ8N6N2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TTC9BQ8N6N2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.64■■□□□ 1.38
TTC9BQ8N6N2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TTC9BQ8N6N2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
TTC9BQ8N6N2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TTC9BQ8N6N2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TTC9BQ8N6N2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.64■■□□□ 1.37
TTC9BQ8N6N2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
TTC9BQ8N6N2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
TTC9BQ8N6N2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TTC9BQ8N6N2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TTC9BQ8N6N2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC9BQ8N6N2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
TTC9BQ8N6N2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.63■■□□□ 1.37
TTC9BQ8N6N2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.63■■□□□ 1.37
TTC9BQ8N6N2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TTC9BQ8N6N2 AC133637.1-201ENST00000624115 1537 ntBASIC23.63■■□□□ 1.37
TTC9BQ8N6N2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
TTC9BQ8N6N2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TTC9BQ8N6N2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.62■■□□□ 1.37
TTC9BQ8N6N2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.62■■□□□ 1.37
TTC9BQ8N6N2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.62■■□□□ 1.37
TTC9BQ8N6N2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TTC9BQ8N6N2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TTC9BQ8N6N2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TTC9BQ8N6N2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TTC9BQ8N6N2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.62■■□□□ 1.37
TTC9BQ8N6N2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.62■■□□□ 1.37
TTC9BQ8N6N2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TTC9BQ8N6N2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TTC9BQ8N6N2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TTC9BQ8N6N2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TTC9BQ8N6N2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.61■■□□□ 1.37
TTC9BQ8N6N2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TTC9BQ8N6N2 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.61■■□□□ 1.37
TTC9BQ8N6N2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.61■■□□□ 1.37
TTC9BQ8N6N2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
TTC9BQ8N6N2 AC144652.1-201ENST00000609974 1624 ntBASIC23.61■■□□□ 1.37
TTC9BQ8N6N2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC9BQ8N6N2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.6■■□□□ 1.37
TTC9BQ8N6N2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC9BQ8N6N2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC9BQ8N6N2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC9BQ8N6N2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.6■■□□□ 1.37
TTC9BQ8N6N2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC9BQ8N6N2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.6■■□□□ 1.37
TTC9BQ8N6N2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.6■■□□□ 1.37
TTC9BQ8N6N2 AL499627.2-201ENST00000606283 725 ntBASIC23.6■■□□□ 1.37
TTC9BQ8N6N2 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.6■■□□□ 1.37
TTC9BQ8N6N2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC9BQ8N6N2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.6■■□□□ 1.37
TTC9BQ8N6N2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
TTC9BQ8N6N2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC9BQ8N6N2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TTC9BQ8N6N2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC9BQ8N6N2 AC010525.1-201ENST00000585559 441 ntBASIC23.59■■□□□ 1.37
TTC9BQ8N6N2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.59■■□□□ 1.37
TTC9BQ8N6N2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.59■■□□□ 1.37
TTC9BQ8N6N2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
TTC9BQ8N6N2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.59■■□□□ 1.37
TTC9BQ8N6N2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TTC9BQ8N6N2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.59■■□□□ 1.37
TTC9BQ8N6N2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
TTC9BQ8N6N2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TTC9BQ8N6N2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TTC9BQ8N6N2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.58■■□□□ 1.37
TTC9BQ8N6N2 DUX4L4-201ENST00000566884 1269 ntBASIC23.58■■□□□ 1.37
TTC9BQ8N6N2 AC126544.1-201ENST00000580842 1059 ntBASIC23.58■■□□□ 1.37
TTC9BQ8N6N2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TTC9BQ8N6N2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC9BQ8N6N2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC9BQ8N6N2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
TTC9BQ8N6N2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.57■■□□□ 1.36
TTC9BQ8N6N2 FP325331.1-202ENST00000623531 1380 ntBASIC23.57■■□□□ 1.36
TTC9BQ8N6N2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TTC9BQ8N6N2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.57■■□□□ 1.36
TTC9BQ8N6N2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TTC9BQ8N6N2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TTC9BQ8N6N2 IRS3P-201ENST00000223076 1006 ntBASIC23.56■■□□□ 1.36
TTC9BQ8N6N2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms