Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC27.2■■□□□ 1.94
FAM43AQ8N2R8 MIR939-201ENST00000401314 82 ntBASIC27.2■■□□□ 1.94
FAM43AQ8N2R8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
FAM43AQ8N2R8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC27.2■■□□□ 1.94
FAM43AQ8N2R8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
FAM43AQ8N2R8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
FAM43AQ8N2R8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
FAM43AQ8N2R8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
FAM43AQ8N2R8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC27.19■■□□□ 1.94
FAM43AQ8N2R8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
FAM43AQ8N2R8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC27.19■■□□□ 1.94
FAM43AQ8N2R8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
FAM43AQ8N2R8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
FAM43AQ8N2R8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
FAM43AQ8N2R8 MIR6821-201ENST00000617625 74 ntBASIC27.19■■□□□ 1.94
FAM43AQ8N2R8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
FAM43AQ8N2R8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
FAM43AQ8N2R8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
FAM43AQ8N2R8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC27.18■■□□□ 1.94
FAM43AQ8N2R8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC27.18■■□□□ 1.94
FAM43AQ8N2R8 AP001330.3-201ENST00000520123 633 ntBASIC27.18■■□□□ 1.94
FAM43AQ8N2R8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
FAM43AQ8N2R8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
FAM43AQ8N2R8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.18■■□□□ 1.94
FAM43AQ8N2R8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.17■■□□□ 1.94
FAM43AQ8N2R8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
FAM43AQ8N2R8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC27.17■■□□□ 1.94
FAM43AQ8N2R8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC27.17■■□□□ 1.94
FAM43AQ8N2R8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
FAM43AQ8N2R8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
FAM43AQ8N2R8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
FAM43AQ8N2R8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
FAM43AQ8N2R8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
FAM43AQ8N2R8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
FAM43AQ8N2R8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
FAM43AQ8N2R8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC27.16■■□□□ 1.94
FAM43AQ8N2R8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC27.16■■□□□ 1.94
FAM43AQ8N2R8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
FAM43AQ8N2R8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC27.16■■□□□ 1.94
FAM43AQ8N2R8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.16■■□□□ 1.94
FAM43AQ8N2R8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC27.16■■□□□ 1.94
FAM43AQ8N2R8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
FAM43AQ8N2R8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC27.16■■□□□ 1.94
FAM43AQ8N2R8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
FAM43AQ8N2R8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
FAM43AQ8N2R8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC27.15■■□□□ 1.94
FAM43AQ8N2R8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC27.15■■□□□ 1.94
FAM43AQ8N2R8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
FAM43AQ8N2R8 LBH-205ENST00000407930 756 ntTSL 2 BASIC27.15■■□□□ 1.94
FAM43AQ8N2R8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
FAM43AQ8N2R8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
FAM43AQ8N2R8 AL121603.2-201ENST00000557373 2117 ntBASIC27.14■■□□□ 1.94
FAM43AQ8N2R8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
FAM43AQ8N2R8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
FAM43AQ8N2R8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
FAM43AQ8N2R8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.14■■□□□ 1.94
FAM43AQ8N2R8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
FAM43AQ8N2R8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
FAM43AQ8N2R8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
FAM43AQ8N2R8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
FAM43AQ8N2R8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
FAM43AQ8N2R8 AC097381.1-201ENST00000429019 1296 ntBASIC27.13■■□□□ 1.93
FAM43AQ8N2R8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
FAM43AQ8N2R8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
FAM43AQ8N2R8 AC096887.2-201ENST00000623443 1957 ntBASIC27.13■■□□□ 1.93
FAM43AQ8N2R8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
FAM43AQ8N2R8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
FAM43AQ8N2R8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
FAM43AQ8N2R8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
FAM43AQ8N2R8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
FAM43AQ8N2R8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
FAM43AQ8N2R8 AC087623.3-201ENST00000607047 1098 ntBASIC27.12■■□□□ 1.93
FAM43AQ8N2R8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
FAM43AQ8N2R8 EP400NL-214ENST00000641289 2402 ntBASIC27.11■■□□□ 1.93
FAM43AQ8N2R8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
FAM43AQ8N2R8 ABCB10P4-201ENST00000566803 2184 ntBASIC27.11■■□□□ 1.93
FAM43AQ8N2R8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC27.11■■□□□ 1.93
FAM43AQ8N2R8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
FAM43AQ8N2R8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
FAM43AQ8N2R8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC27.11■■□□□ 1.93
FAM43AQ8N2R8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27.11■■□□□ 1.93
FAM43AQ8N2R8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
FAM43AQ8N2R8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
FAM43AQ8N2R8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
FAM43AQ8N2R8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
FAM43AQ8N2R8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
FAM43AQ8N2R8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
FAM43AQ8N2R8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.1■■□□□ 1.93
FAM43AQ8N2R8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC27.1■■□□□ 1.93
FAM43AQ8N2R8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
FAM43AQ8N2R8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
FAM43AQ8N2R8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
FAM43AQ8N2R8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC27.09■■□□□ 1.93
FAM43AQ8N2R8 AC091305.1-201ENST00000479476 895 ntBASIC27.09■■□□□ 1.93
FAM43AQ8N2R8 AL162430.1-201ENST00000480705 870 ntBASIC27.09■■□□□ 1.93
FAM43AQ8N2R8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
FAM43AQ8N2R8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
FAM43AQ8N2R8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
FAM43AQ8N2R8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC27.08■■□□□ 1.93
FAM43AQ8N2R8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms