Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF440Q8IYI8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF440Q8IYI8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF440Q8IYI8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.47■□□□□ 0.87
ZNF440Q8IYI8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.47■□□□□ 0.87
ZNF440Q8IYI8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF440Q8IYI8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF440Q8IYI8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF440Q8IYI8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.47■□□□□ 0.87
ZNF440Q8IYI8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
ZNF440Q8IYI8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF440Q8IYI8 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.47■□□□□ 0.87
ZNF440Q8IYI8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF440Q8IYI8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.47■□□□□ 0.87
ZNF440Q8IYI8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF440Q8IYI8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ZNF440Q8IYI8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF440Q8IYI8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF440Q8IYI8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
ZNF440Q8IYI8 AL035685.1-201ENST00000636663 812 ntBASIC20.46■□□□□ 0.87
ZNF440Q8IYI8 AL353803.4-201ENST00000565882 1934 ntBASIC20.46■□□□□ 0.87
ZNF440Q8IYI8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF440Q8IYI8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZNF440Q8IYI8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
ZNF440Q8IYI8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 MIR6724-1-201ENST00000616420 92 ntBASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 MIR6724-2-201ENST00000616483 92 ntBASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 MIR6724-4-201ENST00000617390 92 ntBASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 MIR6724-3-201ENST00000622482 92 ntBASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZNF440Q8IYI8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF440Q8IYI8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.44■□□□□ 0.86
ZNF440Q8IYI8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF440Q8IYI8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.44■□□□□ 0.86
ZNF440Q8IYI8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF440Q8IYI8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF440Q8IYI8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF440Q8IYI8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF440Q8IYI8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF440Q8IYI8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ZNF440Q8IYI8 LINC01529-204ENST00000636474 1715 ntBASIC20.44■□□□□ 0.86
ZNF440Q8IYI8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF440Q8IYI8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF440Q8IYI8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF440Q8IYI8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.43■□□□□ 0.86
ZNF440Q8IYI8 UNC93B8-201ENST00000511903 705 ntBASIC20.43■□□□□ 0.86
ZNF440Q8IYI8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.43■□□□□ 0.86
ZNF440Q8IYI8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.43■□□□□ 0.86
ZNF440Q8IYI8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.43■□□□□ 0.86
ZNF440Q8IYI8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF440Q8IYI8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.43■□□□□ 0.86
ZNF440Q8IYI8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF440Q8IYI8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF440Q8IYI8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.42■□□□□ 0.86
ZNF440Q8IYI8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.42■□□□□ 0.86
ZNF440Q8IYI8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ZNF440Q8IYI8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.42■□□□□ 0.86
ZNF440Q8IYI8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF440Q8IYI8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF440Q8IYI8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF440Q8IYI8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
ZNF440Q8IYI8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.42■□□□□ 0.86
ZNF440Q8IYI8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ZNF440Q8IYI8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ZNF440Q8IYI8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF440Q8IYI8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
ZNF440Q8IYI8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF440Q8IYI8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ZNF440Q8IYI8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF440Q8IYI8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF440Q8IYI8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
ZNF440Q8IYI8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.41■□□□□ 0.86
ZNF440Q8IYI8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF440Q8IYI8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.41■□□□□ 0.86
ZNF440Q8IYI8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF440Q8IYI8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF440Q8IYI8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.41■□□□□ 0.86
ZNF440Q8IYI8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.41■□□□□ 0.86
ZNF440Q8IYI8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
ZNF440Q8IYI8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ZNF440Q8IYI8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF440Q8IYI8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF440Q8IYI8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF440Q8IYI8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.4■□□□□ 0.86
ZNF440Q8IYI8 KRT16P3-201ENST00000439127 1283 ntBASIC20.4■□□□□ 0.86
ZNF440Q8IYI8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ZNF440Q8IYI8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.4■□□□□ 0.86
ZNF440Q8IYI8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ZNF440Q8IYI8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms