Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAI1Q7Z5J4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAI1Q7Z5J4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.26■□□□□ 0.67
RAI1Q7Z5J4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.26■□□□□ 0.67
RAI1Q7Z5J4 AC126544.1-201ENST00000580842 1059 ntBASIC19.26■□□□□ 0.67
RAI1Q7Z5J4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAI1Q7Z5J4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAI1Q7Z5J4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAI1Q7Z5J4 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.25■□□□□ 0.67
RAI1Q7Z5J4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.25■□□□□ 0.67
RAI1Q7Z5J4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.25■□□□□ 0.67
RAI1Q7Z5J4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAI1Q7Z5J4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAI1Q7Z5J4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAI1Q7Z5J4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAI1Q7Z5J4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RAI1Q7Z5J4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAI1Q7Z5J4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAI1Q7Z5J4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAI1Q7Z5J4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RAI1Q7Z5J4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAI1Q7Z5J4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.24■□□□□ 0.67
RAI1Q7Z5J4 TSPY26P-201ENST00000476365 1326 ntBASIC19.24■□□□□ 0.67
RAI1Q7Z5J4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAI1Q7Z5J4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.24■□□□□ 0.67
RAI1Q7Z5J4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RAI1Q7Z5J4 AC090192.1-201ENST00000517740 490 ntBASIC19.24■□□□□ 0.67
RAI1Q7Z5J4 IGHV3-19-201ENST00000521488 291 ntBASIC19.24■□□□□ 0.67
RAI1Q7Z5J4 ALDH1A3-203ENST00000557963 1670 ntBASIC19.24■□□□□ 0.67
RAI1Q7Z5J4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAI1Q7Z5J4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAI1Q7Z5J4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RAI1Q7Z5J4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAI1Q7Z5J4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAI1Q7Z5J4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.23■□□□□ 0.67
RAI1Q7Z5J4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAI1Q7Z5J4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAI1Q7Z5J4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAI1Q7Z5J4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAI1Q7Z5J4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.23■□□□□ 0.67
RAI1Q7Z5J4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.23■□□□□ 0.67
RAI1Q7Z5J4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.22■□□□□ 0.67
RAI1Q7Z5J4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RAI1Q7Z5J4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAI1Q7Z5J4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAI1Q7Z5J4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.22■□□□□ 0.67
RAI1Q7Z5J4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
RAI1Q7Z5J4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.22■□□□□ 0.67
RAI1Q7Z5J4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.22■□□□□ 0.67
RAI1Q7Z5J4 pRNA.6-201ENST00000610482 90 ntBASIC19.22■□□□□ 0.67
RAI1Q7Z5J4 pRNA.5-201ENST00000612139 90 ntBASIC19.22■□□□□ 0.67
RAI1Q7Z5J4 pRNA.11-201ENST00000618423 90 ntBASIC19.22■□□□□ 0.67
RAI1Q7Z5J4 pRNA.13-201ENST00000619112 90 ntBASIC19.22■□□□□ 0.67
RAI1Q7Z5J4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RAI1Q7Z5J4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAI1Q7Z5J4 ABCB10P4-201ENST00000566803 2184 ntBASIC19.22■□□□□ 0.67
RAI1Q7Z5J4 MIR572-201ENST00000384983 95 ntBASIC19.21■□□□□ 0.67
RAI1Q7Z5J4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAI1Q7Z5J4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAI1Q7Z5J4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.21■□□□□ 0.67
RAI1Q7Z5J4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.21■□□□□ 0.67
RAI1Q7Z5J4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAI1Q7Z5J4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
RAI1Q7Z5J4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAI1Q7Z5J4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.21■□□□□ 0.67
RAI1Q7Z5J4 YBX1P1-201ENST00000445822 960 ntBASIC19.21■□□□□ 0.67
RAI1Q7Z5J4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.21■□□□□ 0.67
RAI1Q7Z5J4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.21■□□□□ 0.67
RAI1Q7Z5J4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAI1Q7Z5J4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAI1Q7Z5J4 AC141586.4-201ENST00000624558 1573 ntBASIC19.21■□□□□ 0.67
RAI1Q7Z5J4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.2■□□□□ 0.66
RAI1Q7Z5J4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RAI1Q7Z5J4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAI1Q7Z5J4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAI1Q7Z5J4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAI1Q7Z5J4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAI1Q7Z5J4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAI1Q7Z5J4 AC092437.1-201ENST00000624794 1048 ntBASIC19.2■□□□□ 0.66
RAI1Q7Z5J4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAI1Q7Z5J4 AC093323.1-202ENST00000635031 2045 ntBASIC19.2■□□□□ 0.66
RAI1Q7Z5J4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAI1Q7Z5J4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.2■□□□□ 0.66
RAI1Q7Z5J4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAI1Q7Z5J4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.2■□□□□ 0.66
RAI1Q7Z5J4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.19■□□□□ 0.66
RAI1Q7Z5J4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAI1Q7Z5J4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.19■□□□□ 0.66
RAI1Q7Z5J4 AC010525.1-201ENST00000585559 441 ntBASIC19.19■□□□□ 0.66
RAI1Q7Z5J4 AL358852.1-201ENST00000623174 1268 ntBASIC19.19■□□□□ 0.66
RAI1Q7Z5J4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
RAI1Q7Z5J4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAI1Q7Z5J4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.19■□□□□ 0.66
RAI1Q7Z5J4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.19■□□□□ 0.66
RAI1Q7Z5J4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.19■□□□□ 0.66
RAI1Q7Z5J4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.19■□□□□ 0.66
RAI1Q7Z5J4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.19■□□□□ 0.66
RAI1Q7Z5J4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAI1Q7Z5J4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAI1Q7Z5J4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms