Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.39■□□□□ 0.53
SSX9Q7RTT3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.39■□□□□ 0.53
SSX9Q7RTT3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.39■□□□□ 0.53
SSX9Q7RTT3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSX9Q7RTT3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSX9Q7RTT3 AC131274.2-201ENST00000580697 1507 ntBASIC18.39■□□□□ 0.53
SSX9Q7RTT3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.38■□□□□ 0.53
SSX9Q7RTT3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SSX9Q7RTT3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.38■□□□□ 0.53
SSX9Q7RTT3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX9Q7RTT3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX9Q7RTT3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.38■□□□□ 0.53
SSX9Q7RTT3 AC022616.5-201ENST00000518796 181 ntBASIC18.38■□□□□ 0.53
SSX9Q7RTT3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SSX9Q7RTT3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX9Q7RTT3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX9Q7RTT3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.38■□□□□ 0.53
SSX9Q7RTT3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.38■□□□□ 0.53
SSX9Q7RTT3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SSX9Q7RTT3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.37■□□□□ 0.53
SSX9Q7RTT3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SSX9Q7RTT3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.37■□□□□ 0.53
SSX9Q7RTT3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX9Q7RTT3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX9Q7RTT3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX9Q7RTT3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX9Q7RTT3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SSX9Q7RTT3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SSX9Q7RTT3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SSX9Q7RTT3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX9Q7RTT3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX9Q7RTT3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX9Q7RTT3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX9Q7RTT3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SSX9Q7RTT3 AC004987.1-201ENST00000428627 508 ntBASIC18.36■□□□□ 0.53
SSX9Q7RTT3 ALDH1A3-203ENST00000557963 1670 ntBASIC18.36■□□□□ 0.53
SSX9Q7RTT3 AC019171.1-201ENST00000601251 1056 ntBASIC18.36■□□□□ 0.53
SSX9Q7RTT3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SSX9Q7RTT3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SSX9Q7RTT3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.35■□□□□ 0.53
SSX9Q7RTT3 AC092068.2-201ENST00000590491 1708 ntBASIC18.35■□□□□ 0.53
SSX9Q7RTT3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.35■□□□□ 0.53
SSX9Q7RTT3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX9Q7RTT3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SSX9Q7RTT3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX9Q7RTT3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX9Q7RTT3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSX9Q7RTT3 ATP5G2P3-201ENST00000429083 425 ntBASIC18.35■□□□□ 0.53
SSX9Q7RTT3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SSX9Q7RTT3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSX9Q7RTT3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.35■□□□□ 0.53
SSX9Q7RTT3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.35■□□□□ 0.53
SSX9Q7RTT3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSX9Q7RTT3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SSX9Q7RTT3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSX9Q7RTT3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSX9Q7RTT3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SSX9Q7RTT3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 AC120024.1-201ENST00000562672 995 ntBASIC18.34■□□□□ 0.53
SSX9Q7RTT3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSX9Q7RTT3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSX9Q7RTT3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSX9Q7RTT3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSX9Q7RTT3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SSX9Q7RTT3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.33■□□□□ 0.53
SSX9Q7RTT3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SSX9Q7RTT3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.33■□□□□ 0.52
SSX9Q7RTT3 AC010980.1-201ENST00000587192 1142 ntBASIC18.33■□□□□ 0.52
SSX9Q7RTT3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SSX9Q7RTT3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SSX9Q7RTT3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX9Q7RTT3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SSX9Q7RTT3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSX9Q7RTT3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX9Q7RTT3 DUSP8P3-201ENST00000399571 1760 ntBASIC18.32■□□□□ 0.52
SSX9Q7RTT3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSX9Q7RTT3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SSX9Q7RTT3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX9Q7RTT3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX9Q7RTT3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSX9Q7RTT3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSX9Q7RTT3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
SSX9Q7RTT3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SSX9Q7RTT3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms