Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRK2Q5S007 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LRRK2Q5S007 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRK2Q5S007 POU5F1P3-201ENST00000428824 1078 ntBASIC19.8■□□□□ 0.76
LRRK2Q5S007 AC098934.4-201ENST00000564127 592 ntBASIC19.8■□□□□ 0.76
LRRK2Q5S007 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRRK2Q5S007 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRK2Q5S007 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LRRK2Q5S007 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.79■□□□□ 0.76
LRRK2Q5S007 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRK2Q5S007 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRK2Q5S007 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRK2Q5S007 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.79■□□□□ 0.76
LRRK2Q5S007 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRK2Q5S007 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.79■□□□□ 0.76
LRRK2Q5S007 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRK2Q5S007 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.79■□□□□ 0.76
LRRK2Q5S007 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.79■□□□□ 0.76
LRRK2Q5S007 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.79■□□□□ 0.76
LRRK2Q5S007 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRK2Q5S007 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRK2Q5S007 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRK2Q5S007 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRK2Q5S007 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRK2Q5S007 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRK2Q5S007 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRK2Q5S007 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRK2Q5S007 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LRRK2Q5S007 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRK2Q5S007 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRK2Q5S007 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
LRRK2Q5S007 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.77■□□□□ 0.76
LRRK2Q5S007 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRRK2Q5S007 SLC7A5P2-201ENST00000553010 536 ntBASIC19.77■□□□□ 0.76
LRRK2Q5S007 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRRK2Q5S007 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LRRK2Q5S007 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRK2Q5S007 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRK2Q5S007 TSPY6P-201ENST00000448518 926 ntBASIC19.76■□□□□ 0.75
LRRK2Q5S007 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRK2Q5S007 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRK2Q5S007 AL022069.1-201ENST00000568025 1636 ntBASIC19.76■□□□□ 0.75
LRRK2Q5S007 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRK2Q5S007 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRK2Q5S007 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRK2Q5S007 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRRK2Q5S007 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRK2Q5S007 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
LRRK2Q5S007 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRK2Q5S007 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRK2Q5S007 ITM2C-210ENST00000620962 501 ntBASIC19.75■□□□□ 0.75
LRRK2Q5S007 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRK2Q5S007 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LRRK2Q5S007 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.75■□□□□ 0.75
LRRK2Q5S007 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LRRK2Q5S007 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRK2Q5S007 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRK2Q5S007 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.74■□□□□ 0.75
LRRK2Q5S007 AC011767.1-201ENST00000617410 1153 ntBASIC19.74■□□□□ 0.75
LRRK2Q5S007 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.74■□□□□ 0.75
LRRK2Q5S007 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRK2Q5S007 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRRK2Q5S007 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.74■□□□□ 0.75
LRRK2Q5S007 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LRRK2Q5S007 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.74■□□□□ 0.75
LRRK2Q5S007 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRK2Q5S007 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRK2Q5S007 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LRRK2Q5S007 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRK2Q5S007 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRK2Q5S007 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRRK2Q5S007 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.73■□□□□ 0.75
LRRK2Q5S007 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRK2Q5S007 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRK2Q5S007 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRK2Q5S007 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRK2Q5S007 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.73■□□□□ 0.75
LRRK2Q5S007 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LRRK2Q5S007 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.73■□□□□ 0.75
LRRK2Q5S007 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.73■□□□□ 0.75
LRRK2Q5S007 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.73■□□□□ 0.75
LRRK2Q5S007 DUX4L4-201ENST00000566884 1269 ntBASIC19.73■□□□□ 0.75
LRRK2Q5S007 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.73■□□□□ 0.75
LRRK2Q5S007 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.73■□□□□ 0.75
LRRK2Q5S007 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
LRRK2Q5S007 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRK2Q5S007 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRK2Q5S007 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRK2Q5S007 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRRK2Q5S007 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.72■□□□□ 0.75
LRRK2Q5S007 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.72■□□□□ 0.75
LRRK2Q5S007 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.72■□□□□ 0.75
LRRK2Q5S007 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LRRK2Q5S007 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRK2Q5S007 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
LRRK2Q5S007 GCSHP5-201ENST00000443090 522 ntBASIC19.72■□□□□ 0.75
LRRK2Q5S007 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRRK2Q5S007 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.72■□□□□ 0.75
LRRK2Q5S007 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.72■□□□□ 0.75
LRRK2Q5S007 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms