Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 YIL047C-AYIL047C-A 369 nt5.32□□□□□ -1.56
SSL2Q00578 RPS31YLR167W 459 nt5.32□□□□□ -1.56
SSL2Q00578 CKB2YOR039W 777 nt5.32□□□□□ -1.56
SSL2Q00578 YPL113CYPL113C 1191 nt5.32□□□□□ -1.56
SSL2Q00578 CLN2YPL256C 1638 nt5.32□□□□□ -1.56
SSL2Q00578 ARN2YHL047C 1863 nt5.32□□□□□ -1.56
SSL2Q00578 FAP1YNL023C 2898 nt5.32□□□□□ -1.56
SSL2Q00578 ACC1YNR016C 6702 nt5.32□□□□□ -1.56
SSL2Q00578 PDR10YOR328W 4695 nt5.32□□□□□ -1.56
SSL2Q00578 STE20YHL007C 2820 nt5.31□□□□□ -1.56
SSL2Q00578 EUG1YDR518W 1554 nt5.31□□□□□ -1.56
SSL2Q00578 LHP1YDL051W 828 nt5.31□□□□□ -1.56
SSL2Q00578 YFR035CYFR035C 345 nt5.31□□□□□ -1.56
SSL2Q00578 ERG20YJL167W 1059 nt5.31□□□□□ -1.56
SSL2Q00578 YNL217WYNL217W 981 nt5.31□□□□□ -1.56
SSL2Q00578 LTO1YNL260C 597 nt5.31□□□□□ -1.56
SSL2Q00578 YIF1YNL263C 945 nt5.31□□□□□ -1.56
SSL2Q00578 YOR169CYOR169C 465 nt5.31□□□□□ -1.56
SSL2Q00578 SMA1YPL027W 738 nt5.31□□□□□ -1.56
SSL2Q00578 AFT1YGL071W 2073 nt5.31□□□□□ -1.56
SSL2Q00578 YAP1802YGR241C 1707 nt5.31□□□□□ -1.56
SSL2Q00578 APL6YGR261C 2430 nt5.31□□□□□ -1.56
SSL2Q00578 SMP1YBR182C 1359 nt5.3□□□□□ -1.56
SSL2Q00578 YFR034W-AYFR034W-A 288 nt5.3□□□□□ -1.56
SSL2Q00578 NPY1YGL067W 1155 nt5.3□□□□□ -1.56
SSL2Q00578 PUS6YGR169C 1215 nt5.3□□□□□ -1.56
SSL2Q00578 YHR193C-AYHR193C-A 375 nt5.3□□□□□ -1.56
SSL2Q00578 YHR212W-AYHR212W-A 204 nt5.3□□□□□ -1.56
SSL2Q00578 POL32YJR043C 1053 nt5.3□□□□□ -1.56
SSL2Q00578 RSM26YJR101W 801 nt5.3□□□□□ -1.56
SSL2Q00578 TEF4YKL081W 1239 nt5.3□□□□□ -1.56
SSL2Q00578 GMH1YKR030W 822 nt5.3□□□□□ -1.56
SSL2Q00578 YAR061WYAR061W 204 nt5.3□□□□□ -1.56
SSL2Q00578 YLR326WYLR326W 723 nt5.3□□□□□ -1.56
SSL2Q00578 YBL006W-AYBL006W-A 150 nt5.3□□□□□ -1.56
SSL2Q00578 ARL3YPL051W 597 nt5.3□□□□□ -1.56
SSL2Q00578 YDL109CYDL109C 1944 nt5.3□□□□□ -1.56
SSL2Q00578 WTM2YOR229W 1404 nt5.3□□□□□ -1.56
SSL2Q00578 TGL1YKL140W 1647 nt5.3□□□□□ -1.56
SSL2Q00578 HSE1YHL002W 1359 nt5.29□□□□□ -1.56
SSL2Q00578 MBP1YDL056W 2502 nt5.29□□□□□ -1.56
SSL2Q00578 LUC7YDL087C 786 nt5.29□□□□□ -1.56
SSL2Q00578 MHR1YDR296W 681 nt5.29□□□□□ -1.56
SSL2Q00578 YGR204C-AYGR204C-A 114 nt5.29□□□□□ -1.56
SSL2Q00578 ALB1YJL122W 528 nt5.29□□□□□ -1.56
SSL2Q00578 DID4YKL002W 699 nt5.29□□□□□ -1.56
SSL2Q00578 PAU17YLL025W 375 nt5.29□□□□□ -1.56
SSL2Q00578 YNL143CYNL143C 393 nt5.29□□□□□ -1.56
SSL2Q00578 TRM10YOL093W 882 nt5.29□□□□□ -1.56
SSL2Q00578 MAK3YPR051W 531 nt5.29□□□□□ -1.56
SSL2Q00578 RCK2YLR248W 1833 nt5.29□□□□□ -1.56
SSL2Q00578 TAF5YBR198C 2397 nt5.29□□□□□ -1.56
SSL2Q00578 DRN1YGR093W 1524 nt5.28□□□□□ -1.56
SSL2Q00578 CUS1YMR240C 1311 nt5.28□□□□□ -1.56
SSL2Q00578 ZPR1YGR211W 1461 nt5.28□□□□□ -1.56
SSL2Q00578 PCL8YPL219W 1479 nt5.28□□□□□ -1.56
SSL2Q00578 LST7YGR057C 729 nt5.28□□□□□ -1.56
SSL2Q00578 YJR012CYJR012C 624 nt5.28□□□□□ -1.56
SSL2Q00578 NTR2YKR022C 969 nt5.28□□□□□ -1.56
SSL2Q00578 CSR1YLR380W 1227 nt5.28□□□□□ -1.56
SSL2Q00578 RUF5-1RUF5-1 710 nt5.28□□□□□ -1.56
SSL2Q00578 RUF5-2RUF5-2 710 nt5.28□□□□□ -1.56
SSL2Q00578 SRL4YPL033C 846 nt5.28□□□□□ -1.56
SSL2Q00578 YPL068CYPL068C 882 nt5.28□□□□□ -1.56
SSL2Q00578 CBP6YBR120C 489 nt5.28□□□□□ -1.56
SSL2Q00578 PBP2YBR233W 1242 nt5.28□□□□□ -1.56
SSL2Q00578 YLR345WYLR345W 1530 nt5.28□□□□□ -1.56
SSL2Q00578 TSL1YML100W 3297 nt5.28□□□□□ -1.56
SSL2Q00578 ATH1YPR026W 3636 nt5.27□□□□□ -1.57
SSL2Q00578 NOP16YER002W 696 nt5.27□□□□□ -1.57
SSL2Q00578 YGR122WYGR122W 1209 nt5.27□□□□□ -1.57
SSL2Q00578 YHB1YGR234W 1200 nt5.27□□□□□ -1.57
SSL2Q00578 EST3YIL009C-A 546 nt5.27□□□□□ -1.57
SSL2Q00578 ORM2YLR350W 651 nt5.27□□□□□ -1.57
SSL2Q00578 SLZ1YNL196C 897 nt5.27□□□□□ -1.57
SSL2Q00578 YOR342CYOR342C 960 nt5.27□□□□□ -1.57
SSL2Q00578 SAP155YFR040W 3009 nt5.27□□□□□ -1.57
SSL2Q00578 DOA1YKL213C 2148 nt5.27□□□□□ -1.57
SSL2Q00578 KCC4YCL024W 3114 nt5.27□□□□□ -1.57
SSL2Q00578 SNF3YDL194W 2655 nt5.27□□□□□ -1.57
SSL2Q00578 HRR25YPL204W 1485 nt5.26□□□□□ -1.57
SSL2Q00578 HIM1YDR317W 1245 nt5.26□□□□□ -1.57
SSL2Q00578 YEL045CYEL045C 426 nt5.26□□□□□ -1.57
SSL2Q00578 YER084WYER084W 387 nt5.26□□□□□ -1.57
SSL2Q00578 YIR021W-AYIR021W-A 213 nt5.26□□□□□ -1.57
SSL2Q00578 YAR019W-AYAR019W-A 333 nt5.26□□□□□ -1.57
SSL2Q00578 YLR271WYLR271W 825 nt5.26□□□□□ -1.57
SSL2Q00578 YBL062WYBL062W 381 nt5.26□□□□□ -1.57
SSL2Q00578 CPR8YNR028W 927 nt5.26□□□□□ -1.57
SSL2Q00578 TOM5YPR133W-A 153 nt5.26□□□□□ -1.57
SSL2Q00578 snR3snR3 194 nt5.26□□□□□ -1.57
SSL2Q00578 YGR125WYGR125W 3111 nt5.26□□□□□ -1.57
SSL2Q00578 GLT1YDL171C 6438 nt5.26□□□□□ -1.57
SSL2Q00578 YMR196WYMR196W 3267 nt5.26□□□□□ -1.57
SSL2Q00578 RAD7YJR052W 1698 nt5.25□□□□□ -1.57
SSL2Q00578 MAL13YGR288W 1422 nt5.25□□□□□ -1.57
SSL2Q00578 RRP3YHR065C 1506 nt5.25□□□□□ -1.57
SSL2Q00578 OCA4YCR095C 1089 nt5.25□□□□□ -1.57
SSL2Q00578 YDR029WYDR029W 315 nt5.25□□□□□ -1.57
SSL2Q00578 YDR445CYDR445C 408 nt5.25□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms