Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.59■□□□□ 0.73
HIST1H3AP68431 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H3AP68431 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.59■□□□□ 0.73
HIST1H3AP68431 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.59■□□□□ 0.73
HIST1H3AP68431 UNC93B8-201ENST00000511903 705 ntBASIC19.59■□□□□ 0.73
HIST1H3AP68431 AL035685.1-201ENST00000636663 812 ntBASIC19.59■□□□□ 0.73
HIST1H3AP68431 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HIST1H3AP68431 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H3AP68431 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
HIST1H3AP68431 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
HIST1H3AP68431 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
HIST1H3AP68431 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.58■□□□□ 0.73
HIST1H3AP68431 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H3AP68431 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.58■□□□□ 0.72
HIST1H3AP68431 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H3AP68431 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
HIST1H3AP68431 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.58■□□□□ 0.72
HIST1H3AP68431 FP325331.1-202ENST00000623531 1380 ntBASIC19.57■□□□□ 0.72
HIST1H3AP68431 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H3AP68431 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.57■□□□□ 0.72
HIST1H3AP68431 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H3AP68431 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H3AP68431 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H3AP68431 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H3AP68431 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H3AP68431 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
HIST1H3AP68431 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
HIST1H3AP68431 TSPY9P-201ENST00000440215 945 ntBASIC19.57■□□□□ 0.72
HIST1H3AP68431 TSPY11P-201ENST00000442607 1045 ntBASIC19.57■□□□□ 0.72
HIST1H3AP68431 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.57■□□□□ 0.72
HIST1H3AP68431 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HIST1H3AP68431 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H3AP68431 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H3AP68431 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HIST1H3AP68431 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H3AP68431 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H3AP68431 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
HIST1H3AP68431 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H3AP68431 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H3AP68431 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H3AP68431 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H3AP68431 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H3AP68431 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HIST1H3AP68431 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H3AP68431 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HIST1H3AP68431 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.56■□□□□ 0.72
HIST1H3AP68431 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H3AP68431 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.56■□□□□ 0.72
HIST1H3AP68431 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST1H3AP68431 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.56■□□□□ 0.72
HIST1H3AP68431 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H3AP68431 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H3AP68431 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
HIST1H3AP68431 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HIST1H3AP68431 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HIST1H3AP68431 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H3AP68431 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H3AP68431 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
HIST1H3AP68431 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HIST1H3AP68431 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H3AP68431 AC009102.2-201ENST00000606772 1639 ntBASIC19.54■□□□□ 0.72
HIST1H3AP68431 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.54■□□□□ 0.72
HIST1H3AP68431 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HIST1H3AP68431 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HIST1H3AP68431 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.54■□□□□ 0.72
HIST1H3AP68431 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.54■□□□□ 0.72
HIST1H3AP68431 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.54■□□□□ 0.72
HIST1H3AP68431 MIR6724-1-201ENST00000616420 92 ntBASIC19.54■□□□□ 0.72
HIST1H3AP68431 MIR6724-2-201ENST00000616483 92 ntBASIC19.54■□□□□ 0.72
HIST1H3AP68431 MIR6724-4-201ENST00000617390 92 ntBASIC19.54■□□□□ 0.72
HIST1H3AP68431 MIR6724-3-201ENST00000622482 92 ntBASIC19.54■□□□□ 0.72
HIST1H3AP68431 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H3AP68431 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HIST1H3AP68431 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H3AP68431 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.54■□□□□ 0.72
HIST1H3AP68431 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.54■□□□□ 0.72
HIST1H3AP68431 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H3AP68431 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H3AP68431 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HIST1H3AP68431 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H3AP68431 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.53■□□□□ 0.72
HIST1H3AP68431 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.53■□□□□ 0.72
HIST1H3AP68431 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.53■□□□□ 0.72
HIST1H3AP68431 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H3AP68431 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H3AP68431 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.53■□□□□ 0.72
HIST1H3AP68431 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HIST1H3AP68431 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H3AP68431 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HIST1H3AP68431 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H3AP68431 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H3AP68431 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.52■□□□□ 0.72
HIST1H3AP68431 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H3AP68431 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H3AP68431 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.52■□□□□ 0.72
HIST1H3AP68431 LINC01529-204ENST00000636474 1715 ntBASIC19.52■□□□□ 0.72
HIST1H3AP68431 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H3AP68431 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H3AP68431 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.52■□□□□ 0.72
HIST1H3AP68431 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms