Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
WNT3AP56704 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
WNT3AP56704 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
WNT3AP56704 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.66■■□□□ 1.22
WNT3AP56704 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.66■■□□□ 1.22
WNT3AP56704 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.66■■□□□ 1.22
WNT3AP56704 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.66■■□□□ 1.22
WNT3AP56704 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.66■■□□□ 1.22
WNT3AP56704 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
WNT3AP56704 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
WNT3AP56704 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
WNT3AP56704 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.65■■□□□ 1.22
WNT3AP56704 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.65■■□□□ 1.22
WNT3AP56704 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.65■■□□□ 1.22
WNT3AP56704 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
WNT3AP56704 AL117332.1-201ENST00000622628 974 ntBASIC22.65■■□□□ 1.22
WNT3AP56704 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.65■■□□□ 1.22
WNT3AP56704 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.65■■□□□ 1.22
WNT3AP56704 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
WNT3AP56704 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
WNT3AP56704 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
WNT3AP56704 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
WNT3AP56704 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
WNT3AP56704 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.64■■□□□ 1.22
WNT3AP56704 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
WNT3AP56704 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
WNT3AP56704 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.64■■□□□ 1.21
WNT3AP56704 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
WNT3AP56704 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.64■■□□□ 1.21
WNT3AP56704 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.64■■□□□ 1.21
WNT3AP56704 AC068473.5-201ENST00000616428 2072 ntBASIC22.64■■□□□ 1.21
WNT3AP56704 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
WNT3AP56704 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
WNT3AP56704 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.63■■□□□ 1.21
WNT3AP56704 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
WNT3AP56704 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
WNT3AP56704 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
WNT3AP56704 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
WNT3AP56704 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
WNT3AP56704 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
WNT3AP56704 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
WNT3AP56704 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
WNT3AP56704 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
WNT3AP56704 MIR3621-201ENST00000580529 85 ntBASIC22.62■■□□□ 1.21
WNT3AP56704 AL356740.2-201ENST00000601559 647 ntBASIC22.62■■□□□ 1.21
WNT3AP56704 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.62■■□□□ 1.21
WNT3AP56704 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
WNT3AP56704 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
WNT3AP56704 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.62■■□□□ 1.21
WNT3AP56704 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
WNT3AP56704 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
WNT3AP56704 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.61■■□□□ 1.21
WNT3AP56704 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
WNT3AP56704 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
WNT3AP56704 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
WNT3AP56704 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
WNT3AP56704 C17orf82-201ENST00000623772 1530 ntBASIC22.61■■□□□ 1.21
WNT3AP56704 FP325331.1-202ENST00000623531 1380 ntBASIC22.61■■□□□ 1.21
WNT3AP56704 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
WNT3AP56704 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.6■■□□□ 1.21
WNT3AP56704 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
WNT3AP56704 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
WNT3AP56704 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
WNT3AP56704 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
WNT3AP56704 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.6■■□□□ 1.21
WNT3AP56704 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
WNT3AP56704 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.6■■□□□ 1.21
WNT3AP56704 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
WNT3AP56704 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
WNT3AP56704 LINC01529-204ENST00000636474 1715 ntBASIC22.6■■□□□ 1.21
WNT3AP56704 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.59■■□□□ 1.21
WNT3AP56704 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
WNT3AP56704 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.59■■□□□ 1.21
WNT3AP56704 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
WNT3AP56704 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
WNT3AP56704 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
WNT3AP56704 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
WNT3AP56704 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.59■■□□□ 1.21
WNT3AP56704 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
WNT3AP56704 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
WNT3AP56704 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
WNT3AP56704 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
WNT3AP56704 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.58■■□□□ 1.21
WNT3AP56704 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
WNT3AP56704 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
WNT3AP56704 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.58■■□□□ 1.21
WNT3AP56704 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
WNT3AP56704 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
WNT3AP56704 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.58■■□□□ 1.21
WNT3AP56704 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
WNT3AP56704 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.58■■□□□ 1.21
WNT3AP56704 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
WNT3AP56704 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.58■■□□□ 1.2
WNT3AP56704 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
WNT3AP56704 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
WNT3AP56704 AC133561.1-201ENST00000568600 2415 ntBASIC22.57■■□□□ 1.2
WNT3AP56704 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
WNT3AP56704 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
WNT3AP56704 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
WNT3AP56704 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms