Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PTPN5P54829 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PTPN5P54829 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
PTPN5P54829 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PTPN5P54829 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PTPN5P54829 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN5P54829 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN5P54829 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
PTPN5P54829 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN5P54829 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN5P54829 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
PTPN5P54829 TSPY26P-201ENST00000476365 1326 ntBASIC23.19■■□□□ 1.3
PTPN5P54829 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN5P54829 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PTPN5P54829 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.19■■□□□ 1.3
PTPN5P54829 RAP2CP1-201ENST00000605103 478 ntBASIC23.19■■□□□ 1.3
PTPN5P54829 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
PTPN5P54829 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.19■■□□□ 1.3
PTPN5P54829 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTPN5P54829 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.18■■□□□ 1.3
PTPN5P54829 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.18■■□□□ 1.3
PTPN5P54829 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.18■■□□□ 1.3
PTPN5P54829 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.18■■□□□ 1.3
PTPN5P54829 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.18■■□□□ 1.3
PTPN5P54829 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PTPN5P54829 CD99P1-205ENST00000527459 561 ntBASIC23.18■■□□□ 1.3
PTPN5P54829 KRT18P14-201ENST00000534205 1250 ntBASIC23.18■■□□□ 1.3
PTPN5P54829 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.18■■□□□ 1.3
PTPN5P54829 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PTPN5P54829 AC241377.3-202ENST00000626088 1088 ntBASIC23.17■■□□□ 1.3
PTPN5P54829 AC241585.3-202ENST00000628937 1088 ntBASIC23.17■■□□□ 1.3
PTPN5P54829 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PTPN5P54829 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PTPN5P54829 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.17■■□□□ 1.3
PTPN5P54829 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
PTPN5P54829 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PTPN5P54829 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.16■■□□□ 1.3
PTPN5P54829 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.16■■□□□ 1.3
PTPN5P54829 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPN5P54829 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PTPN5P54829 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPN5P54829 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PTPN5P54829 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PTPN5P54829 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTPN5P54829 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTPN5P54829 CDCA4P2-201ENST00000441182 718 ntBASIC23.15■■□□□ 1.3
PTPN5P54829 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.15■■□□□ 1.3
PTPN5P54829 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.15■■□□□ 1.3
PTPN5P54829 AL109923.1-201ENST00000618799 583 ntBASIC23.15■■□□□ 1.3
PTPN5P54829 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTPN5P54829 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PTPN5P54829 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.15■■□□□ 1.3
PTPN5P54829 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PTPN5P54829 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
PTPN5P54829 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.14■■□□□ 1.29
PTPN5P54829 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PTPN5P54829 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.29
PTPN5P54829 MIR6084-201ENST00000622012 110 ntBASIC23.14■■□□□ 1.29
PTPN5P54829 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.14■■□□□ 1.29
PTPN5P54829 AC073111.5-205ENST00000641717 521 ntBASIC23.14■■□□□ 1.29
PTPN5P54829 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PTPN5P54829 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
PTPN5P54829 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.14■■□□□ 1.29
PTPN5P54829 AC141586.4-201ENST00000624558 1573 ntBASIC23.14■■□□□ 1.29
PTPN5P54829 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTPN5P54829 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PTPN5P54829 AL139125.2-201ENST00000623134 1869 ntBASIC23.13■■□□□ 1.29
PTPN5P54829 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.13■■□□□ 1.29
PTPN5P54829 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.13■■□□□ 1.29
PTPN5P54829 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.13■■□□□ 1.29
PTPN5P54829 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.13■■□□□ 1.29
PTPN5P54829 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.13■■□□□ 1.29
PTPN5P54829 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.13■■□□□ 1.29
PTPN5P54829 AL354811.1-201ENST00000610286 706 ntBASIC23.13■■□□□ 1.29
PTPN5P54829 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.13■■□□□ 1.29
PTPN5P54829 HLA-L-211ENST00000482052 1765 ntBASIC23.13■■□□□ 1.29
PTPN5P54829 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.13■■□□□ 1.29
PTPN5P54829 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.13■■□□□ 1.29
PTPN5P54829 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.12■■□□□ 1.29
PTPN5P54829 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTPN5P54829 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.12■■□□□ 1.29
PTPN5P54829 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTPN5P54829 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PTPN5P54829 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PTPN5P54829 AC026185.1-201ENST00000445748 174 ntBASIC23.12■■□□□ 1.29
PTPN5P54829 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.12■■□□□ 1.29
PTPN5P54829 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.12■■□□□ 1.29
PTPN5P54829 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PTPN5P54829 AC012414.1-201ENST00000556676 535 ntBASIC23.12■■□□□ 1.29
PTPN5P54829 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.12■■□□□ 1.29
PTPN5P54829 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.12■■□□□ 1.29
PTPN5P54829 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTPN5P54829 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTPN5P54829 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PTPN5P54829 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PTPN5P54829 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PTPN5P54829 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.11■■□□□ 1.29
PTPN5P54829 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PTPN5P54829 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
PTPN5P54829 TSPY20P-201ENST00000450910 630 ntBASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms