Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 YOL035CYOL035C 303 nt6.53□□□□□ -1.36
CAF120P53836 TRS33YOR115C 807 nt6.53□□□□□ -1.36
CAF120P53836 GDS1YOR355W 1569 nt6.52□□□□□ -1.36
CAF120P53836 VMA2YBR127C 1554 nt6.52□□□□□ -1.36
CAF120P53836 YDR114CYDR114C 303 nt6.52□□□□□ -1.37
CAF120P53836 NPY1YGL067W 1155 nt6.52□□□□□ -1.37
CAF120P53836 MF(ALPHA)2YGL089C 363 nt6.52□□□□□ -1.37
CAF120P53836 PEX4YGR133W 552 nt6.52□□□□□ -1.37
CAF120P53836 COX6YHR051W 447 nt6.52□□□□□ -1.37
CAF120P53836 YIL089WYIL089W 618 nt6.52□□□□□ -1.37
CAF120P53836 YKR011CYKR011C 1062 nt6.52□□□□□ -1.37
CAF120P53836 PBA1YLR199C 831 nt6.52□□□□□ -1.37
CAF120P53836 MRPL4YLR439W 960 nt6.52□□□□□ -1.37
CAF120P53836 YNL200CYNL200C 741 nt6.52□□□□□ -1.37
CAF120P53836 SPS18YNL204C 903 nt6.52□□□□□ -1.37
CAF120P53836 ARR2YPR200C 393 nt6.52□□□□□ -1.37
CAF120P53836 ECM7YLR443W 1347 nt6.51□□□□□ -1.37
CAF120P53836 YMR034CYMR034C 1305 nt6.51□□□□□ -1.37
CAF120P53836 KTR6YPL053C 1341 nt6.51□□□□□ -1.37
CAF120P53836 AGE1YDR524C 1449 nt6.51□□□□□ -1.37
CAF120P53836 IME4YGL192W 1803 nt6.51□□□□□ -1.37
CAF120P53836 SIT4YDL047W 936 nt6.51□□□□□ -1.37
CAF120P53836 MPC2YHR162W 390 nt6.51□□□□□ -1.37
CAF120P53836 CBR1YIL043C 855 nt6.51□□□□□ -1.37
CAF120P53836 ADI1YMR009W 540 nt6.51□□□□□ -1.37
CAF120P53836 MED4YOR174W 855 nt6.51□□□□□ -1.37
CAF120P53836 SAM4YPL273W 978 nt6.51□□□□□ -1.37
CAF120P53836 SRP101YDR292C 1866 nt6.51□□□□□ -1.37
CAF120P53836 ADE13YLR359W 1449 nt6.5□□□□□ -1.37
CAF120P53836 VPS36YLR417W 1701 nt6.5□□□□□ -1.37
CAF120P53836 PCL8YPL219W 1479 nt6.5□□□□□ -1.37
CAF120P53836 YDL177CYDL177C 513 nt6.5□□□□□ -1.37
CAF120P53836 YFL013W-AYFL013W-A 804 nt6.5□□□□□ -1.37
CAF120P53836 YGR109W-AYGR109W-A 873 nt6.5□□□□□ -1.37
CAF120P53836 FYV4YHR059W 393 nt6.5□□□□□ -1.37
CAF120P53836 DMA1YHR115C 1251 nt6.5□□□□□ -1.37
CAF120P53836 ELO3YLR372W 1038 nt6.5□□□□□ -1.37
CAF120P53836 ATG34YOL083W 1239 nt6.5□□□□□ -1.37
CAF120P53836 LEE1YPL054W 906 nt6.5□□□□□ -1.37
CAF120P53836 RFC5YBR087W 1065 nt6.5□□□□□ -1.37
CAF120P53836 YLL066CYLL066C 3618 nt6.49□□□□□ -1.37
CAF120P53836 MSS1YMR023C 1581 nt6.49□□□□□ -1.37
CAF120P53836 NOP8YOL144W 1455 nt6.49□□□□□ -1.37
CAF120P53836 VPS74YDR372C 1038 nt6.49□□□□□ -1.37
CAF120P53836 THP2YHR167W 786 nt6.49□□□□□ -1.37
CAF120P53836 YJR071WYJR071W 369 nt6.49□□□□□ -1.37
CAF120P53836 ICT1YLR099C 1185 nt6.49□□□□□ -1.37
CAF120P53836 YML083CYML083C 1257 nt6.49□□□□□ -1.37
CAF120P53836 SCO1YBR037C 888 nt6.49□□□□□ -1.37
CAF120P53836 MEI5YPL121C 669 nt6.49□□□□□ -1.37
CAF120P53836 YOL103W-AYOL103W-A 1323 nt6.49□□□□□ -1.37
CAF120P53836 PTR2YKR093W 1806 nt6.48□□□□□ -1.37
CAF120P53836 RXT3YDL076C 885 nt6.48□□□□□ -1.37
CAF120P53836 MSW1YDR268W 1140 nt6.48□□□□□ -1.37
CAF120P53836 AGA2YGL032C 264 nt6.48□□□□□ -1.37
CAF120P53836 SPO13YHR014W 876 nt6.48□□□□□ -1.37
CAF120P53836 FMP33YJL161W 543 nt6.48□□□□□ -1.37
CAF120P53836 GON7YJL184W 372 nt6.48□□□□□ -1.37
CAF120P53836 YKL018C-AYKL018C-A 300 nt6.48□□□□□ -1.37
CAF120P53836 YKL077WYKL077W 1179 nt6.48□□□□□ -1.37
CAF120P53836 COS9YKL219W 1224 nt6.48□□□□□ -1.37
CAF120P53836 GSP1YLR293C 660 nt6.48□□□□□ -1.37
CAF120P53836 SIT1YEL065W 1887 nt6.47□□□□□ -1.37
CAF120P53836 YJL049WYJL049W 1353 nt6.47□□□□□ -1.37
CAF120P53836 FRE5YOR384W 2085 nt6.47□□□□□ -1.37
CAF120P53836 ATG31YDR022C 591 nt6.47□□□□□ -1.37
CAF120P53836 YDR203WYDR203W 318 nt6.47□□□□□ -1.37
CAF120P53836 QCR6YFR033C 444 nt6.47□□□□□ -1.37
CAF120P53836 PCL5YHR071W 690 nt6.47□□□□□ -1.37
CAF120P53836 YIL021C-AYIL021C-A 270 nt6.47□□□□□ -1.37
CAF120P53836 GVP36YIL041W 981 nt6.47□□□□□ -1.37
CAF120P53836 GLG2YJL137C 1143 nt6.47□□□□□ -1.37
CAF120P53836 RFC2YJR068W 1062 nt6.47□□□□□ -1.37
CAF120P53836 VPH2YKL119C 648 nt6.47□□□□□ -1.37
CAF120P53836 RPL40BYKR094C 387 nt6.47□□□□□ -1.37
CAF120P53836 SDO1YLR022C 753 nt6.47□□□□□ -1.37
CAF120P53836 BOS1YLR078C 735 nt6.47□□□□□ -1.37
CAF120P53836 BER1YLR412W 825 nt6.47□□□□□ -1.37
CAF120P53836 YNL043CYNL043C 321 nt6.47□□□□□ -1.37
CAF120P53836 PEX15YOL044W 1152 nt6.47□□□□□ -1.37
CAF120P53836 OPI11YPR044C 354 nt6.47□□□□□ -1.37
CAF120P53836 YBR284WYBR284W 2394 nt6.47□□□□□ -1.37
CAF120P53836 HFD1YMR110C 1599 nt6.47□□□□□ -1.37
CAF120P53836 MIP1YOR330C 3765 nt6.47□□□□□ -1.37
CAF120P53836 SEC18YBR080C 2277 nt6.47□□□□□ -1.37
CAF120P53836 JIP5YPR169W 1479 nt6.47□□□□□ -1.37
CAF120P53836 HMRA2YCR096C 360 nt6.46□□□□□ -1.38
CAF120P53836 RPL27BYDR471W 411 nt6.46□□□□□ -1.38
CAF120P53836 VFA1YER128W 612 nt6.46□□□□□ -1.38
CAF120P53836 YER133W-AYER133W-A 342 nt6.46□□□□□ -1.38
CAF120P53836 AAD10YJR155W 867 nt6.46□□□□□ -1.38
CAF120P53836 SNO4YMR322C 714 nt6.46□□□□□ -1.38
CAF120P53836 snR11snR11 258 nt6.46□□□□□ -1.38
CAF120P53836 TMA46YOR091W 1038 nt6.46□□□□□ -1.38
CAF120P53836 YOR231C-AYOR231C-A 201 nt6.46□□□□□ -1.38
CAF120P53836 YOR282WYOR282W 321 nt6.46□□□□□ -1.38
CAF120P53836 RDL2YOR286W 450 nt6.46□□□□□ -1.38
CAF120P53836 HSP33YOR391C 714 nt6.46□□□□□ -1.38
CAF120P53836 HSP32YPL280W 714 nt6.46□□□□□ -1.38
CAF120P53836 ATR1YML116W 1629 nt6.46□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 23.2 ms