Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 NTA1YJR062C 1374 nt5.96□□□□□ -1.45
NRD1P53617 NOC4YPR144C 1659 nt5.96□□□□□ -1.46
NRD1P53617 RTT102YGR275W 474 nt5.96□□□□□ -1.46
NRD1P53617 YGR291CYGR291C 222 nt5.96□□□□□ -1.46
NRD1P53617 SUP19tS(UGA)E 82 nt5.96□□□□□ -1.46
NRD1P53617 SUP17tS(UGA)I 82 nt5.96□□□□□ -1.46
NRD1P53617 SUP16tS(UGA)P 82 nt5.96□□□□□ -1.46
NRD1P53617 RNR2YJL026W 1200 nt5.96□□□□□ -1.46
NRD1P53617 YJL068CYJL068C 900 nt5.96□□□□□ -1.46
NRD1P53617 GLG2YJL137C 1143 nt5.96□□□□□ -1.46
NRD1P53617 YKR011CYKR011C 1062 nt5.96□□□□□ -1.46
NRD1P53617 YKR073CYKR073C 321 nt5.96□□□□□ -1.46
NRD1P53617 CTK3YML112W 891 nt5.96□□□□□ -1.46
NRD1P53617 SHP1YBL058W 1272 nt5.96□□□□□ -1.46
NRD1P53617 YNL043CYNL043C 321 nt5.96□□□□□ -1.46
NRD1P53617 ATG34YOL083W 1239 nt5.96□□□□□ -1.46
NRD1P53617 YOR282WYOR282W 321 nt5.96□□□□□ -1.46
NRD1P53617 ECM33YBR078W 1290 nt5.96□□□□□ -1.46 RIP-Chip
NRD1P53617 YPR123CYPR123C 435 nt5.96□□□□□ -1.46
NRD1P53617 YBR298C-AYBR298C-A 222 nt5.96□□□□□ -1.46
NRD1P53617 GIT1YCR098C 1557 nt5.96□□□□□ -1.46
NRD1P53617 HFD1YMR110C 1599 nt5.96□□□□□ -1.46
NRD1P53617 APE3YBR286W 1614 nt5.96□□□□□ -1.46
NRD1P53617 PKC1YBL105C 3456 nt5.95□□□□□ -1.46
NRD1P53617 snR82snR82 268 nt5.95□□□□□ -1.46
NRD1P53617 ATG31YDR022C 591 nt5.95□□□□□ -1.46
NRD1P53617 VMA7YGR020C 357 nt5.95□□□□□ -1.46
NRD1P53617 CAB2YIL083C 1098 nt5.95□□□□□ -1.46
NRD1P53617 SUP2tY(GUA)D 75 nt5.95□□□□□ -1.46
NRD1P53617 SUP11tY(GUA)F1 75 nt5.95□□□□□ -1.46
NRD1P53617 SUP6tY(GUA)F2 75 nt5.95□□□□□ -1.46
NRD1P53617 SUP7tY(GUA)J1 75 nt5.95□□□□□ -1.46
NRD1P53617 SUP4tY(GUA)J2 75 nt5.95□□□□□ -1.46
NRD1P53617 SUP5tY(GUA)M1 75 nt5.95□□□□□ -1.46
NRD1P53617 SUP8tY(GUA)M2 75 nt5.95□□□□□ -1.46
NRD1P53617 SUP3tY(GUA)O 75 nt5.95□□□□□ -1.46
NRD1P53617 YJL007CYJL007C 315 nt5.95□□□□□ -1.46
NRD1P53617 CIS3YJL158C 684 nt5.95□□□□□ -1.46 RIP-Chip
NRD1P53617 IMA5YJL216C 1746 nt5.95□□□□□ -1.46
NRD1P53617 YLL017WYLL017W 312 nt5.95□□□□□ -1.46
NRD1P53617 SAM37YMR060C 984 nt5.95□□□□□ -1.46
NRD1P53617 YNR040WYNR040W 771 nt5.95□□□□□ -1.46 RIP-Chip
NRD1P53617 STP4YDL048C 1473 nt5.95□□□□□ -1.46
NRD1P53617 ERG9YHR190W 1335 nt5.95□□□□□ -1.46
NRD1P53617 RNY1YPL123C 1305 nt5.95□□□□□ -1.46
NRD1P53617 RAD3YER171W 2337 nt5.94□□□□□ -1.46
NRD1P53617 NFI1YOR156C 2181 nt5.94□□□□□ -1.46 RIP-Chip
NRD1P53617 DAL4YIR028W 1908 nt5.94□□□□□ -1.46
NRD1P53617 IMG2YCR071C 441 nt5.94□□□□□ -1.46
NRD1P53617 HMRA2YCR096C 360 nt5.94□□□□□ -1.46
NRD1P53617 COS7YDL248W 1152 nt5.94□□□□□ -1.46
NRD1P53617 UPS3YDR185C 540 nt5.94□□□□□ -1.46
NRD1P53617 MXR1YER042W 555 nt5.94□□□□□ -1.46
NRD1P53617 YFR032C-BYFR032C-B 264 nt5.94□□□□□ -1.46
NRD1P53617 AGE2YIL044C 897 nt5.94□□□□□ -1.46
NRD1P53617 COS5YJR161C 1152 nt5.94□□□□□ -1.46 RIP-Chip
NRD1P53617 AUR1YKL004W 1206 nt5.94□□□□□ -1.46 RIP-Chip
NRD1P53617 GCD7YLR291C 1146 nt5.94□□□□□ -1.46
NRD1P53617 TPP1YMR156C 717 nt5.94□□□□□ -1.46
NRD1P53617 PRM3YPL192C 402 nt5.94□□□□□ -1.46
NRD1P53617 UBX3YDL091C 1368 nt5.93□□□□□ -1.46
NRD1P53617 REF2YDR195W 1602 nt5.93□□□□□ -1.46
NRD1P53617 ATP16YDL004W 483 nt5.93□□□□□ -1.46
NRD1P53617 CPR1YDR155C 489 nt5.93□□□□□ -1.46 RIP-Chip
NRD1P53617 BMH1YER177W 804 nt5.93□□□□□ -1.46 RIP-Chip
NRD1P53617 PUS6YGR169C 1215 nt5.93□□□□□ -1.46
NRD1P53617 TDA10YGR205W 873 nt5.93□□□□□ -1.46
NRD1P53617 YHR069C-AYHR069C-A 363 nt5.93□□□□□ -1.46
NRD1P53617 ERP5YHR110W 639 nt5.93□□□□□ -1.46 RIP-Chip
NRD1P53617 DJP1YIR004W 1299 nt5.93□□□□□ -1.46
NRD1P53617 CBF1YJR060W 1056 nt5.93□□□□□ -1.46
NRD1P53617 ASK1YKL052C 879 nt5.93□□□□□ -1.46
NRD1P53617 AAD15YOL165C 432 nt5.93□□□□□ -1.46
NRD1P53617 YOR231C-AYOR231C-A 201 nt5.93□□□□□ -1.46
NRD1P53617 YPR078CYPR078C 1119 nt5.93□□□□□ -1.46
NRD1P53617 MRK1YDL079C 1506 nt5.93□□□□□ -1.46
NRD1P53617 ABD1YBR236C 1311 nt5.93□□□□□ -1.46
NRD1P53617 ACT1YFL039C 1128 nt5.92□□□□□ -1.46
NRD1P53617 YGR127WYGR127W 939 nt5.92□□□□□ -1.46 RIP-Chip
NRD1P53617 ACF4YJR083C 930 nt5.92□□□□□ -1.46 RIP-Chip
NRD1P53617 YBL036CYBL036C 774 nt5.92□□□□□ -1.46
NRD1P53617 CUE2YKL090W 1332 nt5.92□□□□□ -1.46
NRD1P53617 SKI2YLR398C 3864 nt5.92□□□□□ -1.46
NRD1P53617 HXK2YGL253W 1461 nt5.91□□□□□ -1.46
NRD1P53617 MRS1YIR021W 1092 nt5.91□□□□□ -1.46 RIP-Chip
NRD1P53617 RPE1YJL121C 717 nt5.91□□□□□ -1.46
NRD1P53617 NCE103YNL036W 666 nt5.91□□□□□ -1.46 RIP-Chip
NRD1P53617 YAF9YNL107W 681 nt5.91□□□□□ -1.46
NRD1P53617 YNL203CYNL203C 612 nt5.91□□□□□ -1.46
NRD1P53617 YNL296WYNL296W 315 nt5.91□□□□□ -1.46
NRD1P53617 RPS9AYPL081W 594 nt5.91□□□□□ -1.46
NRD1P53617 CBP3YPL215W 1008 nt5.91□□□□□ -1.46
NRD1P53617 XBP1YIL101C 1944 nt5.9□□□□□ -1.46
NRD1P53617 SNF11YDR073W 510 nt5.9□□□□□ -1.46 RIP-Chip
NRD1P53617 YGL258W-AYGL258W-A 234 nt5.9□□□□□ -1.46
NRD1P53617 RME1YGR044C 903 nt5.9□□□□□ -1.46 RIP-Chip
NRD1P53617 RPR2YIR015W 435 nt5.9□□□□□ -1.46 RIP-Chip
NRD1P53617 RPC17YJL011C 486 nt5.9□□□□□ -1.46
NRD1P53617 SNN1YNL086W 309 nt5.9□□□□□ -1.46 RIP-Chip
NRD1P53617 TMA64YDR117C 1698 nt5.9□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms