Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 CDC4YFL009W 2340 nt4.92□□□□□ -1.62
RPT4P53549 RKM4YDR257C 1485 nt4.92□□□□□ -1.62
RPT4P53549 IBA57YJR122W 1494 nt4.92□□□□□ -1.62
RPT4P53549 VID22YLR373C 2706 nt4.92□□□□□ -1.62
RPT4P53549 MCM4YPR019W 2802 nt4.91□□□□□ -1.62
RPT4P53549 TPS3YMR261C 3165 nt4.91□□□□□ -1.62
RPT4P53549 ATH1YPR026W 3636 nt4.91□□□□□ -1.62
RPT4P53549 PTC1YDL006W 846 nt4.91□□□□□ -1.62
RPT4P53549 INO2YDR123C 915 nt4.91□□□□□ -1.62
RPT4P53549 NAT2YGR147C 867 nt4.91□□□□□ -1.62
RPT4P53549 IFM1YOL023W 2031 nt4.9□□□□□ -1.62
RPT4P53549 YDR445CYDR445C 408 nt4.9□□□□□ -1.63
RPT4P53549 SPO74YGL170C 1242 nt4.9□□□□□ -1.63
RPT4P53549 MAD2YJL030W 591 nt4.9□□□□□ -1.63
RPT4P53549 PER33YLR064W 822 nt4.9□□□□□ -1.63
RPT4P53549 CDC42YLR229C 576 nt4.9□□□□□ -1.63
RPT4P53549 ARR1YPR199C 885 nt4.9□□□□□ -1.63
RPT4P53549 YOL075CYOL075C 3885 nt4.9□□□□□ -1.63
RPT4P53549 PCL10YGL134W 1302 nt4.9□□□□□ -1.63
RPT4P53549 COP1YDL145C 3606 nt4.9□□□□□ -1.63
RPT4P53549 RAD52YML032C 1416 nt4.89□□□□□ -1.63
RPT4P53549 YEL028WYEL028W 462 nt4.89□□□□□ -1.63
RPT4P53549 YGR122WYGR122W 1209 nt4.89□□□□□ -1.63
RPT4P53549 YML116W-AYML116W-A 303 nt4.89□□□□□ -1.63
RPT4P53549 SIP5YMR140W 1470 nt4.88□□□□□ -1.63
RPT4P53549 DHH1YDL160C 1521 nt4.88□□□□□ -1.63
RPT4P53549 BRE4YDL231C 3378 nt4.88□□□□□ -1.63
RPT4P53549 GRE3YHR104W 984 nt4.88□□□□□ -1.63
RPT4P53549 YHR193C-AYHR193C-A 375 nt4.88□□□□□ -1.63
RPT4P53549 RDN5-1RDN5-1 121 nt4.88□□□□□ -1.63
RPT4P53549 RDN5-6RDN5-6 121 nt4.88□□□□□ -1.63
RPT4P53549 VPS69YPR087W 321 nt4.88□□□□□ -1.63
RPT4P53549 PXA1YPL147W 2613 nt4.88□□□□□ -1.63
RPT4P53549 VPS36YLR417W 1701 nt4.87□□□□□ -1.63
RPT4P53549 FUR1YHR128W 651 nt4.87□□□□□ -1.63
RPT4P53549 RPL14AYKL006W 417 nt4.87□□□□□ -1.63
RPT4P53549 HEK2YBL032W 1146 nt4.87□□□□□ -1.63
RPT4P53549 MPH2YDL247W 1830 nt4.87□□□□□ -1.63
RPT4P53549 FPK1YNR047W 2682 nt4.87□□□□□ -1.63
RPT4P53549 MTR10YOR160W 2919 nt4.86□□□□□ -1.63
RPT4P53549 PAH1YMR165C 2589 nt4.86□□□□□ -1.63
RPT4P53549 PER1YCR044C 1074 nt4.86□□□□□ -1.63
RPT4P53549 snR7-SsnR7-S 179 nt4.86□□□□□ -1.63
RPT4P53549 YDL183CYDL183C 963 nt4.86□□□□□ -1.63
RPT4P53549 CAX4YGR036C 720 nt4.86□□□□□ -1.63
RPT4P53549 tQ(UUG)CtQ(UUG)C 72 nt4.86□□□□□ -1.63
RPT4P53549 tQ(UUG)D1tQ(UUG)D1 72 nt4.86□□□□□ -1.63
RPT4P53549 tQ(UUG)D2tQ(UUG)D2 72 nt4.86□□□□□ -1.63
RPT4P53549 tQ(UUG)D3tQ(UUG)D3 72 nt4.86□□□□□ -1.63
RPT4P53549 tQ(UUG)E1tQ(UUG)E1 72 nt4.86□□□□□ -1.63
RPT4P53549 tQ(UUG)HtQ(UUG)H 72 nt4.86□□□□□ -1.63
RPT4P53549 tQ(UUG)LtQ(UUG)L 72 nt4.86□□□□□ -1.63
RPT4P53549 IGO2YHR132W-A 396 nt4.86□□□□□ -1.63
RPT4P53549 YIL171WYIL171W 330 nt4.86□□□□□ -1.63
RPT4P53549 YKL169CYKL169C 384 nt4.86□□□□□ -1.63
RPT4P53549 OMS1YDR316W 1416 nt4.86□□□□□ -1.63
RPT4P53549 EAR1YMR171C 1653 nt4.86□□□□□ -1.63
RPT4P53549 UBP9YER098W 2265 nt4.85□□□□□ -1.63
RPT4P53549 BUD13YGL174W 801 nt4.85□□□□□ -1.63
RPT4P53549 YHR032C-AYHR032C-A 120 nt4.85□□□□□ -1.63
RPT4P53549 YKR075CYKR075C 924 nt4.85□□□□□ -1.63
RPT4P53549 YLR346CYLR346C 306 nt4.85□□□□□ -1.63
RPT4P53549 EOS1YNL080C 1101 nt4.85□□□□□ -1.63
RPT4P53549 PPG1YNR032W 1107 nt4.85□□□□□ -1.63
RPT4P53549 HXT7YDR342C 1713 nt4.85□□□□□ -1.63
RPT4P53549 HXT6YDR343C 1713 nt4.85□□□□□ -1.63
RPT4P53549 SEC9YGR009C 1956 nt4.85□□□□□ -1.63
RPT4P53549 CRT10YOL063C 2874 nt4.84□□□□□ -1.63
RPT4P53549 APL6YGR261C 2430 nt4.84□□□□□ -1.63
RPT4P53549 SEC2YNL272C 2280 nt4.84□□□□□ -1.63
RPT4P53549 SET4YJL105W 1683 nt4.84□□□□□ -1.63
RPT4P53549 ECT1YGR007W 972 nt4.84□□□□□ -1.63
RPT4P53549 MCM1YMR043W 861 nt4.84□□□□□ -1.63
RPT4P53549 YPL073CYPL073C 486 nt4.84□□□□□ -1.63
RPT4P53549 TIP20YGL145W 2106 nt4.84□□□□□ -1.64
RPT4P53549 MST1YKL194C 1389 nt4.83□□□□□ -1.64
RPT4P53549 HER2YMR293C 1395 nt4.83□□□□□ -1.64
RPT4P53549 LSB1YGR136W 726 nt4.83□□□□□ -1.64
RPT4P53549 YLL017WYLL017W 312 nt4.83□□□□□ -1.64
RPT4P53549 ROT1YMR200W 771 nt4.83□□□□□ -1.64
RPT4P53549 YNL143CYNL143C 393 nt4.83□□□□□ -1.64
RPT4P53549 AIP1YMR092C 1848 nt4.83□□□□□ -1.64
RPT4P53549 SUM1YDR310C 3189 nt4.83□□□□□ -1.64
RPT4P53549 LAS1YKR063C 1509 nt4.82□□□□□ -1.64
RPT4P53549 LTV1YKL143W 1392 nt4.82□□□□□ -1.64
RPT4P53549 AHA1YDR214W 1053 nt4.82□□□□□ -1.64
RPT4P53549 YER147C-AYER147C-A 411 nt4.82□□□□□ -1.64
RPT4P53549 BAT2YJR148W 1131 nt4.82□□□□□ -1.64
RPT4P53549 IMA3YIL172C 1770 nt4.82□□□□□ -1.64
RPT4P53549 IMA4YJL221C 1770 nt4.82□□□□□ -1.64
RPT4P53549 TOS3YGL179C 1683 nt4.82□□□□□ -1.64
RPT4P53549 YDR282CYDR282C 1245 nt4.81□□□□□ -1.64
RPT4P53549 COX4YGL187C 468 nt4.81□□□□□ -1.64
RPT4P53549 YGL262WYGL262W 528 nt4.81□□□□□ -1.64
RPT4P53549 RAD27YKL113C 1149 nt4.81□□□□□ -1.64
RPT4P53549 YLR124WYLR124W 345 nt4.81□□□□□ -1.64
RPT4P53549 ARC40YBR234C 1155 nt4.81□□□□□ -1.64
RPT4P53549 FKH1YIL131C 1455 nt4.81□□□□□ -1.64
RPT4P53549 KIN4YOR233W 2403 nt4.81□□□□□ -1.64
RPT4P53549 SAP155YFR040W 3009 nt4.8□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 31.4 ms