Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN4P51793 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN4P51793 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN4P51793 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.75■■□□□ 1.39
CLCN4P51793 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN4P51793 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CLCN4P51793 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN4P51793 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN4P51793 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.74■■□□□ 1.39
CLCN4P51793 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN4P51793 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.74■■□□□ 1.39
CLCN4P51793 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.74■■□□□ 1.39
CLCN4P51793 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.74■■□□□ 1.39
CLCN4P51793 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN4P51793 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.74■■□□□ 1.39
CLCN4P51793 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
CLCN4P51793 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN4P51793 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN4P51793 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CLCN4P51793 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN4P51793 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
CLCN4P51793 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN4P51793 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
CLCN4P51793 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CLCN4P51793 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.73■■□□□ 1.39
CLCN4P51793 AC012414.1-201ENST00000556676 535 ntBASIC23.73■■□□□ 1.39
CLCN4P51793 MIR6084-201ENST00000622012 110 ntBASIC23.73■■□□□ 1.39
CLCN4P51793 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN4P51793 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN4P51793 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN4P51793 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CLCN4P51793 AL499627.2-201ENST00000606283 725 ntBASIC23.72■■□□□ 1.39
CLCN4P51793 AL137784.2-201ENST00000607332 1000 ntBASIC23.72■■□□□ 1.39
CLCN4P51793 AC092437.1-201ENST00000624794 1048 ntBASIC23.72■■□□□ 1.39
CLCN4P51793 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CLCN4P51793 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CLCN4P51793 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.72■■□□□ 1.39
CLCN4P51793 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLCN4P51793 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
CLCN4P51793 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLCN4P51793 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLCN4P51793 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLCN4P51793 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.71■■□□□ 1.39
CLCN4P51793 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.71■■□□□ 1.39
CLCN4P51793 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.71■■□□□ 1.39
CLCN4P51793 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.71■■□□□ 1.39
CLCN4P51793 AL354811.1-201ENST00000610286 706 ntBASIC23.71■■□□□ 1.39
CLCN4P51793 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.71■■□□□ 1.39
CLCN4P51793 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLCN4P51793 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CLCN4P51793 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCN4P51793 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCN4P51793 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CLCN4P51793 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCN4P51793 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCN4P51793 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCN4P51793 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CLCN4P51793 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.7■■□□□ 1.38
CLCN4P51793 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CLCN4P51793 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.7■■□□□ 1.38
CLCN4P51793 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.7■■□□□ 1.38
CLCN4P51793 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.7■■□□□ 1.38
CLCN4P51793 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.7■■□□□ 1.38
CLCN4P51793 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CLCN4P51793 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.7■■□□□ 1.38
CLCN4P51793 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.7■■□□□ 1.38
CLCN4P51793 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CLCN4P51793 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLCN4P51793 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLCN4P51793 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLCN4P51793 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CLCN4P51793 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLCN4P51793 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.69■■□□□ 1.38
CLCN4P51793 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CLCN4P51793 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.69■■□□□ 1.38
CLCN4P51793 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLCN4P51793 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CLCN4P51793 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.69■■□□□ 1.38
CLCN4P51793 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.69■■□□□ 1.38
CLCN4P51793 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLCN4P51793 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
CLCN4P51793 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLCN4P51793 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLCN4P51793 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.68■■□□□ 1.38
CLCN4P51793 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CLCN4P51793 AC135731.1-201ENST00000569415 2548 ntBASIC23.68■■□□□ 1.38
CLCN4P51793 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.67■■□□□ 1.38
CLCN4P51793 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLCN4P51793 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.67■■□□□ 1.38
CLCN4P51793 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLCN4P51793 AC022211.4-201ENST00000625094 2161 ntBASIC23.67■■□□□ 1.38
CLCN4P51793 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.67■■□□□ 1.38
CLCN4P51793 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLCN4P51793 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLCN4P51793 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.67■■□□□ 1.38
CLCN4P51793 AC010525.1-201ENST00000585559 441 ntBASIC23.67■■□□□ 1.38
CLCN4P51793 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.67■■□□□ 1.38
CLCN4P51793 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CLCN4P51793 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLCN4P51793 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms