Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.43■□□□□ 0.54
THBS3P49746 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.43■□□□□ 0.54
THBS3P49746 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
THBS3P49746 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THBS3P49746 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THBS3P49746 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THBS3P49746 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THBS3P49746 DUSP8P3-201ENST00000399571 1760 ntBASIC18.42■□□□□ 0.54
THBS3P49746 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THBS3P49746 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THBS3P49746 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
THBS3P49746 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.42■□□□□ 0.54
THBS3P49746 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
THBS3P49746 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
THBS3P49746 GUSBP5-201ENST00000418136 578 ntBASIC18.42■□□□□ 0.54
THBS3P49746 AC004448.1-201ENST00000458332 883 ntBASIC18.42■□□□□ 0.54
THBS3P49746 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.42■□□□□ 0.54
THBS3P49746 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.42■□□□□ 0.54
THBS3P49746 AC079834.2-201ENST00000609776 1949 ntBASIC18.42■□□□□ 0.54
THBS3P49746 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS3P49746 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS3P49746 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS3P49746 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS3P49746 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.41■□□□□ 0.54
THBS3P49746 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS3P49746 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.41■□□□□ 0.54
THBS3P49746 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
THBS3P49746 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.41■□□□□ 0.54
THBS3P49746 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS3P49746 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THBS3P49746 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THBS3P49746 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS3P49746 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
THBS3P49746 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS3P49746 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THBS3P49746 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS3P49746 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
THBS3P49746 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THBS3P49746 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.4■□□□□ 0.54
THBS3P49746 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
THBS3P49746 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS3P49746 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS3P49746 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS3P49746 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.39■□□□□ 0.53
THBS3P49746 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.39■□□□□ 0.53
THBS3P49746 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS3P49746 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.39■□□□□ 0.53
THBS3P49746 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS3P49746 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
THBS3P49746 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
THBS3P49746 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS3P49746 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THBS3P49746 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.38■□□□□ 0.53
THBS3P49746 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS3P49746 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
THBS3P49746 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THBS3P49746 Z92544.1-202ENST00000571933 1220 ntBASIC18.38■□□□□ 0.53
THBS3P49746 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
THBS3P49746 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.38■□□□□ 0.53
THBS3P49746 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.38■□□□□ 0.53
THBS3P49746 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS3P49746 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
THBS3P49746 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS3P49746 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS3P49746 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.37■□□□□ 0.53
THBS3P49746 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS3P49746 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS3P49746 AC239859.2-201ENST00000444165 318 ntBASIC18.37■□□□□ 0.53
THBS3P49746 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS3P49746 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS3P49746 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
THBS3P49746 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
THBS3P49746 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
THBS3P49746 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.36■□□□□ 0.53
THBS3P49746 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
THBS3P49746 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
THBS3P49746 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.36■□□□□ 0.53
THBS3P49746 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.36■□□□□ 0.53
THBS3P49746 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
THBS3P49746 CLDN5-201ENST00000403084 2357 ntBASIC18.36■□□□□ 0.53
THBS3P49746 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.36■□□□□ 0.53
THBS3P49746 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.36■□□□□ 0.53
THBS3P49746 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
THBS3P49746 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.36■□□□□ 0.53
THBS3P49746 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.36■□□□□ 0.53
THBS3P49746 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.36■□□□□ 0.53
THBS3P49746 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
THBS3P49746 C9orf163-202ENST00000624034 2573 ntBASIC18.36■□□□□ 0.53
THBS3P49746 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
THBS3P49746 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
THBS3P49746 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THBS3P49746 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THBS3P49746 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THBS3P49746 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THBS3P49746 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
THBS3P49746 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.35■□□□□ 0.53
THBS3P49746 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
THBS3P49746 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
THBS3P49746 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
THBS3P49746 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms