Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 ABF1YKL112W 2196 nt4.82□□□□□ -1.64
UPF3P48412 PUF2YPR042C 3228 nt4.82□□□□□ -1.64
UPF3P48412 SED4YCR067C 3198 nt4.82□□□□□ -1.64
UPF3P48412 DAL81YIR023W 2913 nt4.82□□□□□ -1.64
UPF3P48412 TPO2YGR138C 1845 nt4.82□□□□□ -1.64
UPF3P48412 SLC1YDL052C 912 nt4.82□□□□□ -1.64
UPF3P48412 SCM3YDL139C 672 nt4.82□□□□□ -1.64
UPF3P48412 HSP31YDR533C 714 nt4.82□□□□□ -1.64
UPF3P48412 IRC6YFR043C 714 nt4.82□□□□□ -1.64
UPF3P48412 ZRT1YGL255W 1131 nt4.82□□□□□ -1.64
UPF3P48412 VMA22YHR060W 546 nt4.82□□□□□ -1.64
UPF3P48412 YMR245WYMR245W 621 nt4.82□□□□□ -1.64
UPF3P48412 ELA1YNL230C 1140 nt4.82□□□□□ -1.64
UPF3P48412 BUB3YOR026W 1026 nt4.82□□□□□ -1.64
UPF3P48412 MFM1YPL060W 1242 nt4.82□□□□□ -1.64
UPF3P48412 MDM38YOL027C 1722 nt4.82□□□□□ -1.64
UPF3P48412 YDR261C-DYDR261C-D 4815 nt4.81□□□□□ -1.64
UPF3P48412 YGR125WYGR125W 3111 nt4.81□□□□□ -1.64
UPF3P48412 AVT1YJR001W 1809 nt4.81□□□□□ -1.64
UPF3P48412 UBX7YBR273C 1311 nt4.81□□□□□ -1.64
UPF3P48412 GRX6YDL010W 696 nt4.81□□□□□ -1.64
UPF3P48412 SUR2YDR297W 1050 nt4.81□□□□□ -1.64
UPF3P48412 YGR204C-AYGR204C-A 114 nt4.81□□□□□ -1.64
UPF3P48412 ATP12YJL180C 978 nt4.81□□□□□ -1.64
UPF3P48412 JLP1YLL057C 1239 nt4.81□□□□□ -1.64
UPF3P48412 NDC1YML031W 1968 nt4.81□□□□□ -1.64
UPF3P48412 ARX1YDR101C 1782 nt4.81□□□□□ -1.64
UPF3P48412 IOC4YMR044W 1428 nt4.8□□□□□ -1.64
UPF3P48412 MSH1YHR120W 2880 nt4.8□□□□□ -1.64
UPF3P48412 SIF2YBR103W 1608 nt4.8□□□□□ -1.64
UPF3P48412 NUP116YMR047C 3342 nt4.8□□□□□ -1.64
UPF3P48412 YDR222WYDR222W 1248 nt4.8□□□□□ -1.64
UPF3P48412 AUA1YFL010W-A 285 nt4.8□□□□□ -1.64
UPF3P48412 YGR269WYGR269W 327 nt4.8□□□□□ -1.64
UPF3P48412 YRA2YKL214C 612 nt4.8□□□□□ -1.64
UPF3P48412 CNS1YBR155W 1158 nt4.8□□□□□ -1.64
UPF3P48412 FAA3YIL009W 2085 nt4.8□□□□□ -1.64
UPF3P48412 HPR1YDR138W 2259 nt4.8□□□□□ -1.64
UPF3P48412 SRS2YJL092W 3525 nt4.79□□□□□ -1.64
UPF3P48412 ORC6YHR118C 1308 nt4.79□□□□□ -1.64
UPF3P48412 COT1YOR316C 1320 nt4.79□□□□□ -1.64
UPF3P48412 YDL241WYDL241W 372 nt4.79□□□□□ -1.64
UPF3P48412 YDR417CYDR417C 372 nt4.79□□□□□ -1.64
UPF3P48412 THI5YFL058W 1023 nt4.79□□□□□ -1.64
UPF3P48412 RPN12YFR052W 825 nt4.79□□□□□ -1.64
UPF3P48412 TRX2YGR209C 315 nt4.79□□□□□ -1.64
UPF3P48412 NSE1YLR007W 1011 nt4.79□□□□□ -1.64
UPF3P48412 ERG3YLR056W 1098 nt4.79□□□□□ -1.64
UPF3P48412 ATP14YLR295C 375 nt4.79□□□□□ -1.64
UPF3P48412 CDA2YLR308W 939 nt4.79□□□□□ -1.64
UPF3P48412 SPS19YNL202W 879 nt4.79□□□□□ -1.64
UPF3P48412 THI12YNL332W 1023 nt4.79□□□□□ -1.64
UPF3P48412 ZPS1YOL154W 750 nt4.79□□□□□ -1.64
UPF3P48412 SER1YOR184W 1188 nt4.79□□□□□ -1.64
UPF3P48412 YJR015WYJR015W 1533 nt4.78□□□□□ -1.64
UPF3P48412 TTI2YJR136C 1266 nt4.78□□□□□ -1.64
UPF3P48412 SFK1YKL051W 1062 nt4.78□□□□□ -1.64
UPF3P48412 RFU1YLR073C 603 nt4.78□□□□□ -1.64
UPF3P48412 ERD2YBL040C 660 nt4.78□□□□□ -1.64
UPF3P48412 SFI1YLL003W 2841 nt4.78□□□□□ -1.64
UPF3P48412 SRO9YCL037C 1305 nt4.77□□□□□ -1.65
UPF3P48412 LHP1YDL051W 828 nt4.77□□□□□ -1.65
UPF3P48412 MNN10YDR245W 1182 nt4.77□□□□□ -1.65
UPF3P48412 RMD5YDR255C 1266 nt4.77□□□□□ -1.65
UPF3P48412 NSG1YHR133C 876 nt4.77□□□□□ -1.65
UPF3P48412 RPS1BYML063W 768 nt4.77□□□□□ -1.65
UPF3P48412 RNA1YMR235C 1224 nt4.77□□□□□ -1.65
UPF3P48412 YOR020W-AYOR020W-A 273 nt4.77□□□□□ -1.65
UPF3P48412 snR17bsnR17b 332 nt4.77□□□□□ -1.65
UPF3P48412 GCN20YFR009W 2259 nt4.77□□□□□ -1.65
UPF3P48412 PUT2YHR037W 1728 nt4.77□□□□□ -1.65
UPF3P48412 TPS3YMR261C 3165 nt4.77□□□□□ -1.65
UPF3P48412 RAD16YBR114W 2373 nt4.76□□□□□ -1.65
UPF3P48412 RTK1YDL025C 1863 nt4.76□□□□□ -1.65
UPF3P48412 MSC2YDR205W 2175 nt4.76□□□□□ -1.65
UPF3P48412 URC2YDR520C 2319 nt4.76□□□□□ -1.65
UPF3P48412 CPR3YML078W 549 nt4.76□□□□□ -1.65
UPF3P48412 TLG2YOL018C 1194 nt4.76□□□□□ -1.65
UPF3P48412 AIM39YOL053W 1188 nt4.76□□□□□ -1.65
UPF3P48412 MET16YPR167C 786 nt4.76□□□□□ -1.65
UPF3P48412 BCH2YKR027W 2298 nt4.76□□□□□ -1.65
UPF3P48412 CDC6YJL194W 1542 nt4.76□□□□□ -1.65
UPF3P48412 YJL206CYJL206C 2277 nt4.75□□□□□ -1.65
UPF3P48412 NAM2YLR382C 2685 nt4.75□□□□□ -1.65
UPF3P48412 BUD22YMR014W 1560 nt4.75□□□□□ -1.65
UPF3P48412 PHO87YCR037C 2772 nt4.75□□□□□ -1.65
UPF3P48412 PTC1YDL006W 846 nt4.75□□□□□ -1.65
UPF3P48412 BGL2YGR282C 942 nt4.75□□□□□ -1.65
UPF3P48412 YKL177WYKL177W 339 nt4.75□□□□□ -1.65
UPF3P48412 ORM2YLR350W 651 nt4.75□□□□□ -1.65
UPF3P48412 NDJ1YOL104C 1059 nt4.75□□□□□ -1.65
UPF3P48412 TRS33YOR115C 807 nt4.75□□□□□ -1.65
UPF3P48412 JEM1YJL073W 1938 nt4.75□□□□□ -1.65
UPF3P48412 STB3YDR169C 1542 nt4.75□□□□□ -1.65
UPF3P48412 SIP1YDR422C 2448 nt4.75□□□□□ -1.65
UPF3P48412 ADP1YCR011C 3150 nt4.75□□□□□ -1.65
UPF3P48412 DOA1YKL213C 2148 nt4.75□□□□□ -1.65
UPF3P48412 HMS1YOR032C 1305 nt4.74□□□□□ -1.65
UPF3P48412 CDC4YFL009W 2340 nt4.74□□□□□ -1.65
UPF3P48412 YGR219WYGR219W 342 nt4.74□□□□□ -1.65
Retrieved 100 of 7,029 protein–RNA pairs in 23.8 ms