Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 RRP36YOR287C 903 nt5.05□□□□□ -1.6
TDP1P38319 YBR196C-BYBR196C-B 105 nt5.05□□□□□ -1.6
TDP1P38319 YBR230W-AYBR230W-A 201 nt5.05□□□□□ -1.6
TDP1P38319 HXT5YHR096C 1779 nt5.05□□□□□ -1.6
TDP1P38319 MAK11YKL021C 1407 nt5.05□□□□□ -1.6
TDP1P38319 CUS1YMR240C 1311 nt5.04□□□□□ -1.6
TDP1P38319 VAC17YCL063W 1272 nt5.04□□□□□ -1.6
TDP1P38319 UTR4YEL038W 684 nt5.04□□□□□ -1.6
TDP1P38319 ECT1YGR007W 972 nt5.04□□□□□ -1.6
TDP1P38319 ROT1YMR200W 771 nt5.04□□□□□ -1.6
TDP1P38319 YNG1YOR064C 660 nt5.04□□□□□ -1.6
TDP1P38319 RMI1YPL024W 726 nt5.04□□□□□ -1.6
TDP1P38319 UBP8YMR223W 1416 nt5.04□□□□□ -1.6
TDP1P38319 MLF3YNL074C 1359 nt5.04□□□□□ -1.6
TDP1P38319 YDL109CYDL109C 1944 nt5.03□□□□□ -1.6
TDP1P38319 TOS3YGL179C 1683 nt5.03□□□□□ -1.6
TDP1P38319 RNH202YDR279W 1053 nt5.03□□□□□ -1.6
TDP1P38319 ACT1YFL039C 1128 nt5.03□□□□□ -1.6
TDP1P38319 YFH7YFR007W 1062 nt5.03□□□□□ -1.6
TDP1P38319 CBP4YGR174C 513 nt5.03□□□□□ -1.6
TDP1P38319 RPC25YKL144C 639 nt5.03□□□□□ -1.6
TDP1P38319 YKR051WYKR051W 1257 nt5.03□□□□□ -1.6
TDP1P38319 IRC25YLR021W 540 nt5.03□□□□□ -1.6
TDP1P38319 RFM1YOR279C 933 nt5.03□□□□□ -1.6
TDP1P38319 GLT1YDL171C 6438 nt5.03□□□□□ -1.6
TDP1P38319 CEG1YGL130W 1380 nt5.03□□□□□ -1.6
TDP1P38319 HST1YOL068C 1512 nt5.02□□□□□ -1.61
TDP1P38319 RAD7YJR052W 1698 nt5.02□□□□□ -1.61
TDP1P38319 SRO9YCL037C 1305 nt5.02□□□□□ -1.61
TDP1P38319 CUP1-1YHR053C 186 nt5.02□□□□□ -1.61
TDP1P38319 CUP1-2YHR055C 186 nt5.02□□□□□ -1.61
TDP1P38319 YJL156W-AYJL156W-A 222 nt5.02□□□□□ -1.61
TDP1P38319 YLR156WYLR156W 345 nt5.02□□□□□ -1.61
TDP1P38319 YLR157W-DYLR157W-D 213 nt5.02□□□□□ -1.61
TDP1P38319 YLR159WYLR159W 345 nt5.02□□□□□ -1.61
TDP1P38319 YLR161WYLR161W 345 nt5.02□□□□□ -1.61
TDP1P38319 YPR071WYPR071W 636 nt5.02□□□□□ -1.61
TDP1P38319 APM2YHL019C 1818 nt5.02□□□□□ -1.61
TDP1P38319 PRM2YIL037C 1971 nt5.02□□□□□ -1.61
TDP1P38319 TPS3YMR261C 3165 nt5.02□□□□□ -1.61
TDP1P38319 MGS1YNL218W 1764 nt5.01□□□□□ -1.61
TDP1P38319 DAL81YIR023W 2913 nt5.01□□□□□ -1.61
TDP1P38319 PRR1YKL116C 1557 nt5.01□□□□□ -1.61
TDP1P38319 ADY2YCR010C 852 nt5.01□□□□□ -1.61
TDP1P38319 TUP1YCR084C 2142 nt5.01□□□□□ -1.61
TDP1P38319 GPM2YDL021W 936 nt5.01□□□□□ -1.61
TDP1P38319 ERD1YDR414C 1089 nt5.01□□□□□ -1.61
TDP1P38319 YER084WYER084W 387 nt5.01□□□□□ -1.61
TDP1P38319 KEG1YFR042W 603 nt5.01□□□□□ -1.61
TDP1P38319 YPT32YGL210W 669 nt5.01□□□□□ -1.61
TDP1P38319 YGR022CYGR022C 330 nt5.01□□□□□ -1.61
TDP1P38319 SMD3YLR147C 306 nt5.01□□□□□ -1.61
TDP1P38319 SPC2YML055W 537 nt5.01□□□□□ -1.61
TDP1P38319 COG5YNL051W 1212 nt5.01□□□□□ -1.61
TDP1P38319 TEX1YNL253W 1269 nt5.01□□□□□ -1.61
TDP1P38319 CSH1YBR161W 1131 nt5.01□□□□□ -1.61
TDP1P38319 SRB6YBR253W 366 nt5.01□□□□□ -1.61
TDP1P38319 DCC1YCL016C 1143 nt5.01□□□□□ -1.61
TDP1P38319 PAL1YDR348C 1500 nt5.01□□□□□ -1.61
TDP1P38319 BDP1YNL039W 1785 nt5.01□□□□□ -1.61
TDP1P38319 GLE2YER107C 1098 nt5□□□□□ -1.61
TDP1P38319 BMH1YER177W 804 nt5□□□□□ -1.61
TDP1P38319 RPL28YGL103W 450 nt5□□□□□ -1.61
TDP1P38319 YHB1YGR234W 1200 nt5□□□□□ -1.61
TDP1P38319 BGL2YGR282C 942 nt5□□□□□ -1.61
TDP1P38319 EFM4YIL064W 774 nt5□□□□□ -1.61
TDP1P38319 YIL089WYIL089W 618 nt5□□□□□ -1.61
TDP1P38319 CBF1YJR060W 1056 nt5□□□□□ -1.61
TDP1P38319 CMC1YKL137W 336 nt5□□□□□ -1.61
TDP1P38319 YOR008W-BYOR008W-B 102 nt5□□□□□ -1.61
TDP1P38319 BUB3YOR026W 1026 nt5□□□□□ -1.61
TDP1P38319 ATP20YPR020W 348 nt5□□□□□ -1.61
TDP1P38319 YPR142CYPR142C 564 nt5□□□□□ -1.61
TDP1P38319 STE7YDL159W 1548 nt5□□□□□ -1.61
TDP1P38319 MMP1YLL061W 1752 nt5□□□□□ -1.61
TDP1P38319 NOT3YIL038C 2511 nt5□□□□□ -1.61
TDP1P38319 GAL10YBR019C 2100 nt5□□□□□ -1.61
TDP1P38319 ALG1YBR110W 1350 nt5□□□□□ -1.61
TDP1P38319 PMT5YDL093W 2232 nt5□□□□□ -1.61
TDP1P38319 SEO1YAL067C 1782 nt4.99□□□□□ -1.61
TDP1P38319 PRR2YDL214C 2100 nt4.99□□□□□ -1.61
TDP1P38319 BRE2YLR015W 1518 nt4.99□□□□□ -1.61
TDP1P38319 SIR1YKR101W 1965 nt4.99□□□□□ -1.61
TDP1P38319 SCW4YGR279C 1161 nt4.99□□□□□ -1.61
TDP1P38319 PRP45YAL032C 1140 nt4.99□□□□□ -1.61
TDP1P38319 DCN1YLR128W 810 nt4.99□□□□□ -1.61
TDP1P38319 NIT3YLR351C 876 nt4.99□□□□□ -1.61
TDP1P38319 AIM10YER087W 1731 nt4.99□□□□□ -1.61
TDP1P38319 RTT106YNL206C 1368 nt4.99□□□□□ -1.61
TDP1P38319 MPH2YDL247W 1830 nt4.99□□□□□ -1.61
TDP1P38319 RSC6YCR052W 1452 nt4.99□□□□□ -1.61
TDP1P38319 YOR1YGR281W 4434 nt4.99□□□□□ -1.61
TDP1P38319 TMN2YDR107C 2019 nt4.99□□□□□ -1.61
TDP1P38319 PRD1YCL057W 2139 nt4.99□□□□□ -1.61
TDP1P38319 FPK1YNR047W 2682 nt4.99□□□□□ -1.61
TDP1P38319 AAD4YDL243C 990 nt4.98□□□□□ -1.61
TDP1P38319 DOS2YDR068W 933 nt4.98□□□□□ -1.61
TDP1P38319 RAV2YDR202C 1056 nt4.98□□□□□ -1.61
TDP1P38319 NAG1YGR031C-A 492 nt4.98□□□□□ -1.61
TDP1P38319 CAX4YGR036C 720 nt4.98□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 23.1 ms