Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
EPHA3P29320 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EPHA3P29320 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EPHA3P29320 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHA3P29320 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
EPHA3P29320 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EPHA3P29320 AC129492.7-201ENST00000622992 756 ntBASIC21.78■■□□□ 1.08
EPHA3P29320 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.78■■□□□ 1.08
EPHA3P29320 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHA3P29320 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.78■■□□□ 1.08
EPHA3P29320 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EPHA3P29320 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
EPHA3P29320 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.77■■□□□ 1.08
EPHA3P29320 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
EPHA3P29320 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
EPHA3P29320 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.77■■□□□ 1.08
EPHA3P29320 U85056.1-201ENST00000616429 682 ntBASIC21.77■■□□□ 1.08
EPHA3P29320 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.77■■□□□ 1.08
EPHA3P29320 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
EPHA3P29320 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
EPHA3P29320 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHA3P29320 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.76■■□□□ 1.07
EPHA3P29320 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHA3P29320 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
EPHA3P29320 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.76■■□□□ 1.07
EPHA3P29320 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
EPHA3P29320 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.76■■□□□ 1.07
EPHA3P29320 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.76■■□□□ 1.07
EPHA3P29320 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
EPHA3P29320 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHA3P29320 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.76■■□□□ 1.07
EPHA3P29320 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHA3P29320 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHA3P29320 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHA3P29320 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
EPHA3P29320 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EPHA3P29320 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.75■■□□□ 1.07
EPHA3P29320 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EPHA3P29320 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.75■■□□□ 1.07
EPHA3P29320 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EPHA3P29320 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.75■■□□□ 1.07
EPHA3P29320 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EPHA3P29320 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EPHA3P29320 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EPHA3P29320 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EPHA3P29320 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
EPHA3P29320 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EPHA3P29320 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EPHA3P29320 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
EPHA3P29320 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EPHA3P29320 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EPHA3P29320 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
EPHA3P29320 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
EPHA3P29320 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.74■■□□□ 1.07
EPHA3P29320 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EPHA3P29320 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.74■■□□□ 1.07
EPHA3P29320 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EPHA3P29320 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.74■■□□□ 1.07
EPHA3P29320 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EPHA3P29320 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EPHA3P29320 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.73■■□□□ 1.07
EPHA3P29320 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EPHA3P29320 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.73■■□□□ 1.07
EPHA3P29320 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
EPHA3P29320 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.73■■□□□ 1.07
EPHA3P29320 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EPHA3P29320 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.73■■□□□ 1.07
EPHA3P29320 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EPHA3P29320 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
EPHA3P29320 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.73■■□□□ 1.07
EPHA3P29320 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EPHA3P29320 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
EPHA3P29320 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA3P29320 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.72■■□□□ 1.07
EPHA3P29320 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA3P29320 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
EPHA3P29320 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA3P29320 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA3P29320 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA3P29320 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.72■■□□□ 1.07
EPHA3P29320 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA3P29320 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA3P29320 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA3P29320 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
EPHA3P29320 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
EPHA3P29320 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
EPHA3P29320 AL353803.4-201ENST00000565882 1934 ntBASIC21.71■■□□□ 1.07
EPHA3P29320 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EPHA3P29320 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.71■■□□□ 1.07
EPHA3P29320 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
EPHA3P29320 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EPHA3P29320 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.71■■□□□ 1.07
EPHA3P29320 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EPHA3P29320 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
EPHA3P29320 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.71■■□□□ 1.07
EPHA3P29320 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EPHA3P29320 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.71■■□□□ 1.07
EPHA3P29320 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
EPHA3P29320 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
EPHA3P29320 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms