Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.65■□□□□ 0.74
ATF1P18846 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.64■□□□□ 0.74
ATF1P18846 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.64■□□□□ 0.74
ATF1P18846 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATF1P18846 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.64■□□□□ 0.74
ATF1P18846 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.64■□□□□ 0.73
ATF1P18846 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATF1P18846 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.64■□□□□ 0.73
ATF1P18846 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATF1P18846 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATF1P18846 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATF1P18846 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATF1P18846 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATF1P18846 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATF1P18846 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATF1P18846 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATF1P18846 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.63■□□□□ 0.73
ATF1P18846 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATF1P18846 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.63■□□□□ 0.73
ATF1P18846 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATF1P18846 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATF1P18846 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ATF1P18846 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATF1P18846 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATF1P18846 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATF1P18846 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
ATF1P18846 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATF1P18846 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.62■□□□□ 0.73
ATF1P18846 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATF1P18846 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATF1P18846 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATF1P18846 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATF1P18846 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
ATF1P18846 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.61■□□□□ 0.73
ATF1P18846 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATF1P18846 ESRRAP2-201ENST00000418437 1549 ntBASIC19.61■□□□□ 0.73
ATF1P18846 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ATF1P18846 AC131274.2-201ENST00000580697 1507 ntBASIC19.61■□□□□ 0.73
ATF1P18846 AL137060.1-201ENST00000618151 2648 ntBASIC19.61■□□□□ 0.73
ATF1P18846 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATF1P18846 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATF1P18846 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATF1P18846 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.61■□□□□ 0.73
ATF1P18846 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.61■□□□□ 0.73
ATF1P18846 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATF1P18846 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.61■□□□□ 0.73
ATF1P18846 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
ATF1P18846 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATF1P18846 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATF1P18846 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATF1P18846 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATF1P18846 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATF1P18846 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATF1P18846 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATF1P18846 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.6■□□□□ 0.73
ATF1P18846 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATF1P18846 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATF1P18846 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ATF1P18846 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATF1P18846 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATF1P18846 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ATF1P18846 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
ATF1P18846 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATF1P18846 BHLHE23-202ENST00000612929 1109 ntBASIC19.59■□□□□ 0.73
ATF1P18846 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATF1P18846 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.59■□□□□ 0.73
ATF1P18846 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATF1P18846 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATF1P18846 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATF1P18846 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
ATF1P18846 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATF1P18846 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.58■□□□□ 0.73
ATF1P18846 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATF1P18846 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATF1P18846 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
ATF1P18846 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.58■□□□□ 0.72
ATF1P18846 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATF1P18846 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATF1P18846 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATF1P18846 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.58■□□□□ 0.72
ATF1P18846 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.57■□□□□ 0.72
ATF1P18846 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATF1P18846 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF1P18846 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.57■□□□□ 0.72
ATF1P18846 ALDH1A3-203ENST00000557963 1670 ntBASIC19.57■□□□□ 0.72
ATF1P18846 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF1P18846 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.57■□□□□ 0.72
ATF1P18846 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.57■□□□□ 0.72
ATF1P18846 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
ATF1P18846 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF1P18846 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATF1P18846 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.57■□□□□ 0.72
ATF1P18846 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ATF1P18846 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF1P18846 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.56■□□□□ 0.72
ATF1P18846 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATF1P18846 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
ATF1P18846 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ATF1P18846 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ATF1P18846 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms