Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN1P18031 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
PTPN1P18031 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN1P18031 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN1P18031 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.79■■□□□ 1.4
PTPN1P18031 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.79■■□□□ 1.4
PTPN1P18031 AC133561.4-201ENST00000566112 224 ntBASIC23.79■■□□□ 1.4
PTPN1P18031 MIR3181-201ENST00000578512 73 ntBASIC23.79■■□□□ 1.4
PTPN1P18031 AL138724.1-201ENST00000606771 1088 ntBASIC23.79■■□□□ 1.4
PTPN1P18031 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.79■■□□□ 1.4
PTPN1P18031 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN1P18031 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN1P18031 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PTPN1P18031 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN1P18031 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.78■■□□□ 1.4
PTPN1P18031 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN1P18031 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PTPN1P18031 AC079630.1-202ENST00000618127 1840 ntBASIC23.78■■□□□ 1.4
PTPN1P18031 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.78■■□□□ 1.4
PTPN1P18031 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN1P18031 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
PTPN1P18031 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.78■■□□□ 1.4
PTPN1P18031 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.77■■□□□ 1.4
PTPN1P18031 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.77■■□□□ 1.4
PTPN1P18031 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.77■■□□□ 1.4
PTPN1P18031 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.77■■□□□ 1.4
PTPN1P18031 DUX4L4-201ENST00000566884 1269 ntBASIC23.77■■□□□ 1.4
PTPN1P18031 pRNA.6-201ENST00000610482 90 ntBASIC23.77■■□□□ 1.4
PTPN1P18031 pRNA.5-201ENST00000612139 90 ntBASIC23.77■■□□□ 1.4
PTPN1P18031 pRNA.11-201ENST00000618423 90 ntBASIC23.77■■□□□ 1.4
PTPN1P18031 pRNA.13-201ENST00000619112 90 ntBASIC23.77■■□□□ 1.4
PTPN1P18031 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.77■■□□□ 1.4
PTPN1P18031 LINC01529-204ENST00000636474 1715 ntBASIC23.76■■□□□ 1.39
PTPN1P18031 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN1P18031 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN1P18031 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN1P18031 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN1P18031 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN1P18031 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.76■■□□□ 1.39
PTPN1P18031 AC005837.3-201ENST00000612163 286 ntBASIC23.76■■□□□ 1.39
PTPN1P18031 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.76■■□□□ 1.39
PTPN1P18031 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN1P18031 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
PTPN1P18031 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN1P18031 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN1P18031 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN1P18031 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN1P18031 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN1P18031 AC011298.3-201ENST00000615796 283 ntBASIC23.75■■□□□ 1.39
PTPN1P18031 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN1P18031 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.75■■□□□ 1.39
PTPN1P18031 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
PTPN1P18031 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PTPN1P18031 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN1P18031 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PTPN1P18031 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN1P18031 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.74■■□□□ 1.39
PTPN1P18031 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.74■■□□□ 1.39
PTPN1P18031 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.74■■□□□ 1.39
PTPN1P18031 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN1P18031 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
PTPN1P18031 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTPN1P18031 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.73■■□□□ 1.39
PTPN1P18031 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTPN1P18031 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.73■■□□□ 1.39
PTPN1P18031 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTPN1P18031 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
PTPN1P18031 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.73■■□□□ 1.39
PTPN1P18031 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.73■■□□□ 1.39
PTPN1P18031 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTPN1P18031 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.73■■□□□ 1.39
PTPN1P18031 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTPN1P18031 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN1P18031 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN1P18031 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN1P18031 MIR4767-201ENST00000582827 78 ntBASIC23.72■■□□□ 1.39
PTPN1P18031 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN1P18031 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.72■■□□□ 1.39
PTPN1P18031 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN1P18031 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN1P18031 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.72■■□□□ 1.39
PTPN1P18031 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PTPN1P18031 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PTPN1P18031 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.71■■□□□ 1.39
PTPN1P18031 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.71■■□□□ 1.39
PTPN1P18031 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PTPN1P18031 AL499627.2-201ENST00000606283 725 ntBASIC23.71■■□□□ 1.39
PTPN1P18031 AL031432.3-201ENST00000607698 485 ntBASIC23.71■■□□□ 1.39
PTPN1P18031 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.7■■□□□ 1.39
PTPN1P18031 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PTPN1P18031 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PTPN1P18031 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PTPN1P18031 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PTPN1P18031 EDA-201ENST00000338901 1233 ntBASIC23.7■■□□□ 1.38
PTPN1P18031 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.7■■□□□ 1.38
PTPN1P18031 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.7■■□□□ 1.38
PTPN1P18031 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.7■■□□□ 1.38
PTPN1P18031 AC136469.2-201ENST00000623944 1028 ntBASIC23.7■■□□□ 1.38
PTPN1P18031 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.7■■□□□ 1.38
PTPN1P18031 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms