Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 SYT6-210ENST00000641643 1587 ntBASIC17.68■□□□□ 0.42
PF4V1P10720 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.68■□□□□ 0.42
PF4V1P10720 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PF4V1P10720 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PF4V1P10720 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PF4V1P10720 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PF4V1P10720 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PF4V1P10720 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PF4V1P10720 EDA-201ENST00000338901 1233 ntBASIC17.67■□□□□ 0.42
PF4V1P10720 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.67■□□□□ 0.42
PF4V1P10720 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PF4V1P10720 AL355001.2-201ENST00000620617 1191 ntBASIC17.67■□□□□ 0.42
PF4V1P10720 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PF4V1P10720 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PF4V1P10720 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PF4V1P10720 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PF4V1P10720 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PF4V1P10720 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PF4V1P10720 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.66■□□□□ 0.42
PF4V1P10720 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PF4V1P10720 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PF4V1P10720 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.66■□□□□ 0.42
PF4V1P10720 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.66■□□□□ 0.42
PF4V1P10720 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PF4V1P10720 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
PF4V1P10720 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PF4V1P10720 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PF4V1P10720 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PF4V1P10720 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PF4V1P10720 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PF4V1P10720 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PF4V1P10720 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PF4V1P10720 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.65■□□□□ 0.42
PF4V1P10720 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.65■□□□□ 0.42
PF4V1P10720 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PF4V1P10720 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PF4V1P10720 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PF4V1P10720 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PF4V1P10720 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PF4V1P10720 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
PF4V1P10720 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PF4V1P10720 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PF4V1P10720 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.64■□□□□ 0.41
PF4V1P10720 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PF4V1P10720 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PF4V1P10720 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.64■□□□□ 0.41
PF4V1P10720 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.64■□□□□ 0.41
PF4V1P10720 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PF4V1P10720 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PF4V1P10720 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PF4V1P10720 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.64■□□□□ 0.41
PF4V1P10720 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PF4V1P10720 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PF4V1P10720 AC009102.2-201ENST00000606772 1639 ntBASIC17.64■□□□□ 0.41
PF4V1P10720 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.64■□□□□ 0.41
PF4V1P10720 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PF4V1P10720 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PF4V1P10720 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PF4V1P10720 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PF4V1P10720 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PF4V1P10720 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PF4V1P10720 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PF4V1P10720 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PF4V1P10720 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PF4V1P10720 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PF4V1P10720 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PF4V1P10720 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PF4V1P10720 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PF4V1P10720 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.63■□□□□ 0.41
PF4V1P10720 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.63■□□□□ 0.41
PF4V1P10720 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.63■□□□□ 0.41
PF4V1P10720 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PF4V1P10720 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PF4V1P10720 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.62■□□□□ 0.41
PF4V1P10720 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PF4V1P10720 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PF4V1P10720 AC093323.1-202ENST00000635031 2045 ntBASIC17.62■□□□□ 0.41
PF4V1P10720 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PF4V1P10720 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PF4V1P10720 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.62■□□□□ 0.41
PF4V1P10720 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PF4V1P10720 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.62■□□□□ 0.41
PF4V1P10720 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.62■□□□□ 0.41
PF4V1P10720 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PF4V1P10720 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PF4V1P10720 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.62■□□□□ 0.41
PF4V1P10720 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PF4V1P10720 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.62■□□□□ 0.41
PF4V1P10720 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PF4V1P10720 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PF4V1P10720 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PF4V1P10720 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PF4V1P10720 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PF4V1P10720 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.61■□□□□ 0.41
PF4V1P10720 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.61■□□□□ 0.41
PF4V1P10720 ZNRF2P3-201ENST00000424200 374 ntBASIC17.61■□□□□ 0.41
PF4V1P10720 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PF4V1P10720 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PF4V1P10720 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
PF4V1P10720 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms