Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
HIST1H2ABP04908 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIST1H2ABP04908 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIST1H2ABP04908 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIST1H2ABP04908 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HIST1H2ABP04908 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HIST1H2ABP04908 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.34■□□□□ 0.85
HIST1H2ABP04908 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.33■□□□□ 0.85
HIST1H2ABP04908 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.33■□□□□ 0.85
HIST1H2ABP04908 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIST1H2ABP04908 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HIST1H2ABP04908 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.33■□□□□ 0.85
HIST1H2ABP04908 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.33■□□□□ 0.85
HIST1H2ABP04908 KRT125P-201ENST00000546827 989 ntBASIC20.33■□□□□ 0.85
HIST1H2ABP04908 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.33■□□□□ 0.85
HIST1H2ABP04908 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.33■□□□□ 0.85
HIST1H2ABP04908 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
HIST1H2ABP04908 DUSP8P3-201ENST00000399571 1760 ntBASIC20.33■□□□□ 0.84
HIST1H2ABP04908 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.33■□□□□ 0.84
HIST1H2ABP04908 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HIST1H2ABP04908 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HIST1H2ABP04908 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
HIST1H2ABP04908 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H2ABP04908 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HIST1H2ABP04908 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.32■□□□□ 0.84
HIST1H2ABP04908 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
HIST1H2ABP04908 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.32■□□□□ 0.84
HIST1H2ABP04908 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
HIST1H2ABP04908 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H2ABP04908 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H2ABP04908 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H2ABP04908 AC021242.3-201ENST00000607598 1377 ntBASIC20.32■□□□□ 0.84
HIST1H2ABP04908 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.32■□□□□ 0.84
HIST1H2ABP04908 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H2ABP04908 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H2ABP04908 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HIST1H2ABP04908 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.31■□□□□ 0.84
HIST1H2ABP04908 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST1H2ABP04908 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST1H2ABP04908 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST1H2ABP04908 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST1H2ABP04908 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.31■□□□□ 0.84
HIST1H2ABP04908 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST1H2ABP04908 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.31■□□□□ 0.84
HIST1H2ABP04908 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.31■□□□□ 0.84
HIST1H2ABP04908 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST1H2ABP04908 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HIST1H2ABP04908 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
HIST1H2ABP04908 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
HIST1H2ABP04908 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.31■□□□□ 0.84
HIST1H2ABP04908 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.31■□□□□ 0.84
HIST1H2ABP04908 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.3■□□□□ 0.84
HIST1H2ABP04908 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HIST1H2ABP04908 C9orf163-202ENST00000624034 2573 ntBASIC20.3■□□□□ 0.84
HIST1H2ABP04908 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST1H2ABP04908 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST1H2ABP04908 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HIST1H2ABP04908 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.3■□□□□ 0.84
HIST1H2ABP04908 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
HIST1H2ABP04908 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HIST1H2ABP04908 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIST1H2ABP04908 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.29■□□□□ 0.84
HIST1H2ABP04908 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIST1H2ABP04908 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIST1H2ABP04908 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HIST1H2ABP04908 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.29■□□□□ 0.84
HIST1H2ABP04908 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.29■□□□□ 0.84
HIST1H2ABP04908 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIST1H2ABP04908 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HIST1H2ABP04908 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.29■□□□□ 0.84
HIST1H2ABP04908 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HIST1H2ABP04908 MIR6722-201ENST00000617286 78 ntBASIC20.29■□□□□ 0.84
HIST1H2ABP04908 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.29■□□□□ 0.84
HIST1H2ABP04908 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.29■□□□□ 0.84
HIST1H2ABP04908 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIST1H2ABP04908 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H2ABP04908 AC005703.6-201ENST00000623265 1329 ntBASIC20.28■□□□□ 0.84
HIST1H2ABP04908 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HIST1H2ABP04908 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
HIST1H2ABP04908 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H2ABP04908 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H2ABP04908 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H2ABP04908 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H2ABP04908 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H2ABP04908 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIST1H2ABP04908 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIST1H2ABP04908 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
HIST1H2ABP04908 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIST1H2ABP04908 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIST1H2ABP04908 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HIST1H2ABP04908 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HIST1H2ABP04908 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HIST1H2ABP04908 RARRES2P1-201ENST00000474487 481 ntBASIC20.27■□□□□ 0.84
HIST1H2ABP04908 Z92544.1-202ENST00000571933 1220 ntBASIC20.27■□□□□ 0.84
HIST1H2ABP04908 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.27■□□□□ 0.84
HIST1H2ABP04908 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HIST1H2ABP04908 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.27■□□□□ 0.83
HIST1H2ABP04908 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HIST1H2ABP04908 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H2ABP04908 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms