Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD74P04233 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD74P04233 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.87■□□□□ 0.61
CD74P04233 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CD74P04233 FBXW4P1-201ENST00000426721 2239 ntBASIC18.87■□□□□ 0.61
CD74P04233 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CD74P04233 RPS2P7-201ENST00000447334 885 ntBASIC18.87■□□□□ 0.61
CD74P04233 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.87■□□□□ 0.61
CD74P04233 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.87■□□□□ 0.61
CD74P04233 AC131274.2-201ENST00000580697 1507 ntBASIC18.87■□□□□ 0.61
CD74P04233 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD74P04233 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CD74P04233 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.87■□□□□ 0.61
CD74P04233 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
CD74P04233 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD74P04233 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD74P04233 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD74P04233 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CD74P04233 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD74P04233 AC022413.1-201ENST00000624602 984 ntBASIC18.86■□□□□ 0.61
CD74P04233 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD74P04233 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD74P04233 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD74P04233 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.86■□□□□ 0.61
CD74P04233 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD74P04233 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD74P04233 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.85■□□□□ 0.61
CD74P04233 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.85■□□□□ 0.61
CD74P04233 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD74P04233 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD74P04233 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD74P04233 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD74P04233 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD74P04233 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD74P04233 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.85■□□□□ 0.61
CD74P04233 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.85■□□□□ 0.61
CD74P04233 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD74P04233 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CD74P04233 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.84■□□□□ 0.61
CD74P04233 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD74P04233 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD74P04233 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD74P04233 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD74P04233 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CD74P04233 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD74P04233 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CD74P04233 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD74P04233 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD74P04233 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD74P04233 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.84■□□□□ 0.61
CD74P04233 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.84■□□□□ 0.61
CD74P04233 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD74P04233 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CD74P04233 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CD74P04233 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CD74P04233 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CD74P04233 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD74P04233 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD74P04233 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CD74P04233 AC080038.3-201ENST00000623346 1952 ntBASIC18.83■□□□□ 0.61
CD74P04233 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD74P04233 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.83■□□□□ 0.6
CD74P04233 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CD74P04233 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CD74P04233 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CD74P04233 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CD74P04233 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD74P04233 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD74P04233 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.82■□□□□ 0.6
CD74P04233 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.82■□□□□ 0.6
CD74P04233 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CD74P04233 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.82■□□□□ 0.6
CD74P04233 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD74P04233 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CD74P04233 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.82■□□□□ 0.6
CD74P04233 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD74P04233 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD74P04233 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD74P04233 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD74P04233 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD74P04233 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD74P04233 ABHD17AP4-201ENST00000411545 909 ntBASIC18.81■□□□□ 0.6
CD74P04233 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.81■□□□□ 0.6
CD74P04233 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.81■□□□□ 0.6
CD74P04233 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CD74P04233 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD74P04233 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.81■□□□□ 0.6
CD74P04233 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD74P04233 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CD74P04233 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD74P04233 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD74P04233 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD74P04233 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.8■□□□□ 0.6
CD74P04233 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD74P04233 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD74P04233 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD74P04233 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD74P04233 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD74P04233 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD74P04233 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 714.7 ms