Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ABCA1O95477 AC012414.1-201ENST00000556676 535 ntBASIC18.72■□□□□ 0.59
ABCA1O95477 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ABCA1O95477 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.72■□□□□ 0.59
ABCA1O95477 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ABCA1O95477 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.72■□□□□ 0.59
ABCA1O95477 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ABCA1O95477 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ABCA1O95477 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
ABCA1O95477 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.71■□□□□ 0.59
ABCA1O95477 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.71■□□□□ 0.59
ABCA1O95477 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA1O95477 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA1O95477 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.71■□□□□ 0.59
ABCA1O95477 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA1O95477 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA1O95477 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCA1O95477 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.71■□□□□ 0.59
ABCA1O95477 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ABCA1O95477 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
ABCA1O95477 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCA1O95477 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ABCA1O95477 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ABCA1O95477 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.7■□□□□ 0.58
ABCA1O95477 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ABCA1O95477 TSPY26P-201ENST00000476365 1326 ntBASIC18.7■□□□□ 0.58
ABCA1O95477 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCA1O95477 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.7■□□□□ 0.58
ABCA1O95477 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.7■□□□□ 0.58
ABCA1O95477 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.69■□□□□ 0.58
ABCA1O95477 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA1O95477 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.69■□□□□ 0.58
ABCA1O95477 AC004911.1-201ENST00000416316 871 ntBASIC18.69■□□□□ 0.58
ABCA1O95477 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.69■□□□□ 0.58
ABCA1O95477 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA1O95477 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA1O95477 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA1O95477 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ABCA1O95477 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA1O95477 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA1O95477 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ABCA1O95477 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ABCA1O95477 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCA1O95477 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCA1O95477 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCA1O95477 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
ABCA1O95477 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ABCA1O95477 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCA1O95477 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ABCA1O95477 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCA1O95477 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.68■□□□□ 0.58
ABCA1O95477 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCA1O95477 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCA1O95477 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCA1O95477 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.67■□□□□ 0.58
ABCA1O95477 KRT18P14-201ENST00000534205 1250 ntBASIC18.67■□□□□ 0.58
ABCA1O95477 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCA1O95477 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ABCA1O95477 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.67■□□□□ 0.58
ABCA1O95477 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ABCA1O95477 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ABCA1O95477 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.66■□□□□ 0.58
ABCA1O95477 CCDC92B-201ENST00000575506 885 ntBASIC18.66■□□□□ 0.58
ABCA1O95477 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ABCA1O95477 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ABCA1O95477 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA1O95477 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA1O95477 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.66■□□□□ 0.58
ABCA1O95477 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA1O95477 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ABCA1O95477 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.66■□□□□ 0.58
ABCA1O95477 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA1O95477 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.66■□□□□ 0.58
ABCA1O95477 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.66■□□□□ 0.58
ABCA1O95477 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.65■□□□□ 0.58
ABCA1O95477 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA1O95477 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ABCA1O95477 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.65■□□□□ 0.58
ABCA1O95477 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.65■□□□□ 0.58
ABCA1O95477 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.65■□□□□ 0.58
ABCA1O95477 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.65■□□□□ 0.58
ABCA1O95477 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.65■□□□□ 0.58
ABCA1O95477 AC009086.3-201ENST00000623486 1008 ntBASIC18.65■□□□□ 0.58
ABCA1O95477 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ABCA1O95477 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA1O95477 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA1O95477 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA1O95477 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA1O95477 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ABCA1O95477 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.65■□□□□ 0.58
ABCA1O95477 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.65■□□□□ 0.58
ABCA1O95477 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.65■□□□□ 0.58
ABCA1O95477 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
ABCA1O95477 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
ABCA1O95477 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ABCA1O95477 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ABCA1O95477 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.64■□□□□ 0.57
ABCA1O95477 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.64■□□□□ 0.57
ABCA1O95477 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ABCA1O95477 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms