Protein–RNA interactions for Protein: O75626

PRDM1, PR domain zinc finger protein 1, humanhuman

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1O75626 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.52■■□□□ 1.84
PRDM1O75626 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PRDM1O75626 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
PRDM1O75626 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
PRDM1O75626 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PRDM1O75626 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PRDM1O75626 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PRDM1O75626 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PRDM1O75626 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.51■■□□□ 1.83
PRDM1O75626 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.51■■□□□ 1.83
PRDM1O75626 pRNA.6-201ENST00000610482 90 ntBASIC26.51■■□□□ 1.83
PRDM1O75626 pRNA.5-201ENST00000612139 90 ntBASIC26.51■■□□□ 1.83
PRDM1O75626 pRNA.11-201ENST00000618423 90 ntBASIC26.51■■□□□ 1.83
PRDM1O75626 pRNA.13-201ENST00000619112 90 ntBASIC26.51■■□□□ 1.83
PRDM1O75626 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PRDM1O75626 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
PRDM1O75626 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PRDM1O75626 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PRDM1O75626 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.5■■□□□ 1.83
PRDM1O75626 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.5■■□□□ 1.83
PRDM1O75626 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PRDM1O75626 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PRDM1O75626 AC079630.1-202ENST00000618127 1840 ntBASIC26.49■■□□□ 1.83
PRDM1O75626 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.49■■□□□ 1.83
PRDM1O75626 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PRDM1O75626 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.49■■□□□ 1.83
PRDM1O75626 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PRDM1O75626 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PRDM1O75626 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
PRDM1O75626 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.48■■□□□ 1.83
PRDM1O75626 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.48■■□□□ 1.83
PRDM1O75626 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.48■■□□□ 1.83
PRDM1O75626 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.48■■□□□ 1.83
PRDM1O75626 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.48■■□□□ 1.83
PRDM1O75626 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PRDM1O75626 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.48■■□□□ 1.83
PRDM1O75626 AC144652.1-201ENST00000609974 1624 ntBASIC26.47■■□□□ 1.83
PRDM1O75626 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PRDM1O75626 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PRDM1O75626 SUDS3P1-201ENST00000505831 966 ntBASIC26.47■■□□□ 1.83
PRDM1O75626 AC011298.3-201ENST00000615796 283 ntBASIC26.47■■□□□ 1.83
PRDM1O75626 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.47■■□□□ 1.83
PRDM1O75626 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
PRDM1O75626 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PRDM1O75626 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PRDM1O75626 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.46■■□□□ 1.83
PRDM1O75626 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PRDM1O75626 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PRDM1O75626 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PRDM1O75626 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.46■■□□□ 1.83
PRDM1O75626 AC142381.2-201ENST00000566120 298 ntBASIC26.46■■□□□ 1.83
PRDM1O75626 AL138724.1-201ENST00000606771 1088 ntBASIC26.46■■□□□ 1.83
PRDM1O75626 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PRDM1O75626 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.46■■□□□ 1.83
PRDM1O75626 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
PRDM1O75626 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
PRDM1O75626 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PRDM1O75626 EDA-201ENST00000338901 1233 ntBASIC26.45■■□□□ 1.82
PRDM1O75626 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.45■■□□□ 1.82
PRDM1O75626 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PRDM1O75626 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PRDM1O75626 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.45■■□□□ 1.82
PRDM1O75626 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.45■■□□□ 1.82
PRDM1O75626 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.45■■□□□ 1.82
PRDM1O75626 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PRDM1O75626 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PRDM1O75626 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
PRDM1O75626 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PRDM1O75626 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PRDM1O75626 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PRDM1O75626 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PRDM1O75626 AF213884.3-201ENST00000563833 479 ntBASIC26.44■■□□□ 1.82
PRDM1O75626 AL355001.2-201ENST00000620617 1191 ntBASIC26.44■■□□□ 1.82
PRDM1O75626 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.44■■□□□ 1.82
PRDM1O75626 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.44■■□□□ 1.82
PRDM1O75626 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
PRDM1O75626 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PRDM1O75626 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PRDM1O75626 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
PRDM1O75626 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
PRDM1O75626 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PRDM1O75626 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PRDM1O75626 AP001330.3-201ENST00000520123 633 ntBASIC26.43■■□□□ 1.82
PRDM1O75626 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.43■■□□□ 1.82
PRDM1O75626 AC136469.2-201ENST00000623944 1028 ntBASIC26.43■■□□□ 1.82
PRDM1O75626 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.43■■□□□ 1.82
PRDM1O75626 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PRDM1O75626 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
PRDM1O75626 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.43■■□□□ 1.82
PRDM1O75626 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
PRDM1O75626 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PRDM1O75626 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PRDM1O75626 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.42■■□□□ 1.82
PRDM1O75626 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PRDM1O75626 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.42■■□□□ 1.82
PRDM1O75626 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.42■■□□□ 1.82
PRDM1O75626 LINC01529-204ENST00000636474 1715 ntBASIC26.42■■□□□ 1.82
PRDM1O75626 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PRDM1O75626 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PRDM1O75626 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms