Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NPHS1O60500 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPHS1O60500 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPHS1O60500 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPHS1O60500 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
NPHS1O60500 AC074183.2-201ENST00000623112 922 ntBASIC21.88■■□□□ 1.09
NPHS1O60500 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.88■■□□□ 1.09
NPHS1O60500 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPHS1O60500 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPHS1O60500 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
NPHS1O60500 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
NPHS1O60500 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
NPHS1O60500 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPHS1O60500 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPHS1O60500 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPHS1O60500 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPHS1O60500 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NPHS1O60500 NTF6A-201ENST00000591175 560 ntBASIC21.87■■□□□ 1.09
NPHS1O60500 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
NPHS1O60500 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
NPHS1O60500 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPHS1O60500 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.87■■□□□ 1.09
NPHS1O60500 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NPHS1O60500 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NPHS1O60500 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
NPHS1O60500 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.86■■□□□ 1.09
NPHS1O60500 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.86■■□□□ 1.09
NPHS1O60500 ABHD17AP5-201ENST00000580133 923 ntBASIC21.86■■□□□ 1.09
NPHS1O60500 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.86■■□□□ 1.09
NPHS1O60500 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
NPHS1O60500 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NPHS1O60500 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NPHS1O60500 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.85■■□□□ 1.09
NPHS1O60500 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NPHS1O60500 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
NPHS1O60500 BHLHE23-202ENST00000612929 1109 ntBASIC21.85■■□□□ 1.09
NPHS1O60500 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.85■■□□□ 1.09
NPHS1O60500 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NPHS1O60500 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NPHS1O60500 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
NPHS1O60500 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.85■■□□□ 1.09
NPHS1O60500 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NPHS1O60500 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
NPHS1O60500 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
NPHS1O60500 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.85■■□□□ 1.09
NPHS1O60500 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NPHS1O60500 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NPHS1O60500 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NPHS1O60500 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPHS1O60500 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPHS1O60500 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPHS1O60500 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPHS1O60500 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
NPHS1O60500 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NPHS1O60500 PVT1_1.1-201ENST00000615125 194 ntBASIC21.84■■□□□ 1.09
NPHS1O60500 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.84■■□□□ 1.09
NPHS1O60500 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
NPHS1O60500 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NPHS1O60500 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
NPHS1O60500 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NPHS1O60500 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
NPHS1O60500 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NPHS1O60500 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.83■■□□□ 1.08
NPHS1O60500 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.83■■□□□ 1.08
NPHS1O60500 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.83■■□□□ 1.08
NPHS1O60500 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
NPHS1O60500 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.82■■□□□ 1.08
NPHS1O60500 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.82■■□□□ 1.08
NPHS1O60500 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.82■■□□□ 1.08
NPHS1O60500 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.82■■□□□ 1.08
NPHS1O60500 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.82■■□□□ 1.08
NPHS1O60500 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.82■■□□□ 1.08
NPHS1O60500 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NPHS1O60500 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPHS1O60500 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.81■■□□□ 1.08
NPHS1O60500 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.81■■□□□ 1.08
NPHS1O60500 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
NPHS1O60500 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.81■■□□□ 1.08
NPHS1O60500 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
NPHS1O60500 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
NPHS1O60500 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NPHS1O60500 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NPHS1O60500 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms