Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CASQ2O14958 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CASQ2O14958 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
CASQ2O14958 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CASQ2O14958 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CASQ2O14958 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CASQ2O14958 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
CASQ2O14958 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CASQ2O14958 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CASQ2O14958 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.27■□□□□ 0.99
CASQ2O14958 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CASQ2O14958 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CASQ2O14958 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CASQ2O14958 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CASQ2O14958 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.26■□□□□ 0.99
CASQ2O14958 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.26■□□□□ 0.99
CASQ2O14958 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CASQ2O14958 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CASQ2O14958 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CASQ2O14958 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CASQ2O14958 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CASQ2O14958 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CASQ2O14958 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CASQ2O14958 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.25■□□□□ 0.99
CASQ2O14958 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
CASQ2O14958 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CASQ2O14958 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.25■□□□□ 0.99
CASQ2O14958 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CASQ2O14958 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CASQ2O14958 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.25■□□□□ 0.99
CASQ2O14958 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CASQ2O14958 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CASQ2O14958 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CASQ2O14958 AC073130.3-201ENST00000624389 2278 ntBASIC21.24■□□□□ 0.99
CASQ2O14958 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CASQ2O14958 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CASQ2O14958 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.24■□□□□ 0.99
CASQ2O14958 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.24■□□□□ 0.99
CASQ2O14958 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CASQ2O14958 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CASQ2O14958 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CASQ2O14958 AC026310.3-201ENST00000625186 2373 ntBASIC21.24■□□□□ 0.99
CASQ2O14958 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CASQ2O14958 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CASQ2O14958 HLA-V-202ENST00000446817 847 ntBASIC21.23■□□□□ 0.99
CASQ2O14958 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CASQ2O14958 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.23■□□□□ 0.99
CASQ2O14958 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CASQ2O14958 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CASQ2O14958 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASQ2O14958 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASQ2O14958 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CASQ2O14958 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CASQ2O14958 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASQ2O14958 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASQ2O14958 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASQ2O14958 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASQ2O14958 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CASQ2O14958 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.22■□□□□ 0.99
CASQ2O14958 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.22■□□□□ 0.99
CASQ2O14958 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASQ2O14958 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASQ2O14958 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CASQ2O14958 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASQ2O14958 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CASQ2O14958 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.21■□□□□ 0.99
CASQ2O14958 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CASQ2O14958 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASQ2O14958 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASQ2O14958 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASQ2O14958 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASQ2O14958 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CASQ2O14958 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASQ2O14958 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CASQ2O14958 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASQ2O14958 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASQ2O14958 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASQ2O14958 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CASQ2O14958 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASQ2O14958 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
CASQ2O14958 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASQ2O14958 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.19■□□□□ 0.98
CASQ2O14958 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.19■□□□□ 0.98
CASQ2O14958 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.19■□□□□ 0.98
CASQ2O14958 AC126177.7-201ENST00000547904 679 ntBASIC21.19■□□□□ 0.98
CASQ2O14958 DUX4L13-201ENST00000554103 1267 ntBASIC21.19■□□□□ 0.98
CASQ2O14958 AP006261.1-201ENST00000584783 668 ntBASIC21.19■□□□□ 0.98
CASQ2O14958 DUX4L15-201ENST00000611059 1267 ntBASIC21.19■□□□□ 0.98
CASQ2O14958 DUX4L23-201ENST00000615195 1269 ntBASIC21.19■□□□□ 0.98
CASQ2O14958 DUX4L24-201ENST00000617576 1269 ntBASIC21.19■□□□□ 0.98
CASQ2O14958 DUX4L22-201ENST00000618238 1269 ntBASIC21.19■□□□□ 0.98
CASQ2O14958 DUX4L20-201ENST00000619712 1269 ntBASIC21.19■□□□□ 0.98
CASQ2O14958 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASQ2O14958 DUX4L21-201ENST00000622058 1269 ntBASIC21.19■□□□□ 0.98
CASQ2O14958 DUX4L10-201ENST00000622460 1267 ntBASIC21.19■□□□□ 0.98
CASQ2O14958 DUX4L25-201ENST00000624915 1269 ntBASIC21.19■□□□□ 0.98
CASQ2O14958 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CASQ2O14958 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CASQ2O14958 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASQ2O14958 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms