Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
AP3D1O14617 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
AP3D1O14617 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.83■□□□□ 0.93
AP3D1O14617 AC137630.3-201ENST00000607245 391 ntBASIC20.83■□□□□ 0.93
AP3D1O14617 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP3D1O14617 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP3D1O14617 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
AP3D1O14617 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP3D1O14617 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.82■□□□□ 0.92
AP3D1O14617 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP3D1O14617 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
AP3D1O14617 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP3D1O14617 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP3D1O14617 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.82■□□□□ 0.92
AP3D1O14617 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
AP3D1O14617 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
AP3D1O14617 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3D1O14617 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.81■□□□□ 0.92
AP3D1O14617 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3D1O14617 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
AP3D1O14617 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
AP3D1O14617 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
AP3D1O14617 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3D1O14617 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.81■□□□□ 0.92
AP3D1O14617 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.81■□□□□ 0.92
AP3D1O14617 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
AP3D1O14617 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
AP3D1O14617 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.81■□□□□ 0.92
AP3D1O14617 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
AP3D1O14617 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.81■□□□□ 0.92
AP3D1O14617 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
AP3D1O14617 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
AP3D1O14617 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP3D1O14617 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
AP3D1O14617 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.8■□□□□ 0.92
AP3D1O14617 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.8■□□□□ 0.92
AP3D1O14617 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP3D1O14617 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.8■□□□□ 0.92
AP3D1O14617 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
AP3D1O14617 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.79■□□□□ 0.92
AP3D1O14617 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3D1O14617 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
AP3D1O14617 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3D1O14617 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3D1O14617 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3D1O14617 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.79■□□□□ 0.92
AP3D1O14617 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
AP3D1O14617 SNX5-217ENST00000606557 1087 ntBASIC20.79■□□□□ 0.92
AP3D1O14617 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3D1O14617 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3D1O14617 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.79■□□□□ 0.92
AP3D1O14617 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3D1O14617 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
AP3D1O14617 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3D1O14617 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.79■□□□□ 0.92
AP3D1O14617 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.79■□□□□ 0.92
AP3D1O14617 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3D1O14617 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
AP3D1O14617 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.78■□□□□ 0.92
AP3D1O14617 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
AP3D1O14617 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3D1O14617 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3D1O14617 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3D1O14617 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP3D1O14617 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3D1O14617 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
AP3D1O14617 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3D1O14617 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.78■□□□□ 0.92
AP3D1O14617 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
AP3D1O14617 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.78■□□□□ 0.92
AP3D1O14617 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3D1O14617 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.78■□□□□ 0.92
AP3D1O14617 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
AP3D1O14617 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
AP3D1O14617 AL024507.2-201ENST00000606070 2574 ntBASIC20.78■□□□□ 0.92
AP3D1O14617 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
AP3D1O14617 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
AP3D1O14617 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.77■□□□□ 0.92
AP3D1O14617 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
AP3D1O14617 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP3D1O14617 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.77■□□□□ 0.92
AP3D1O14617 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.77■□□□□ 0.92
AP3D1O14617 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.77■□□□□ 0.92
AP3D1O14617 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.77■□□□□ 0.92
AP3D1O14617 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
AP3D1O14617 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
AP3D1O14617 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
AP3D1O14617 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
AP3D1O14617 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
AP3D1O14617 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
AP3D1O14617 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP3D1O14617 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP3D1O14617 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP3D1O14617 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
AP3D1O14617 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
AP3D1O14617 PKD1P6-201ENST00000343738 4769 ntBASIC20.76■□□□□ 0.91
AP3D1O14617 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
AP3D1O14617 BX664725.1-201ENST00000438252 379 ntBASIC20.76■□□□□ 0.91
AP3D1O14617 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.76■□□□□ 0.91
AP3D1O14617 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms