Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.37■□□□□ 0.85
NPIPA3F8WFD2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.37■□□□□ 0.85
NPIPA3F8WFD2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.37■□□□□ 0.85
NPIPA3F8WFD2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPA3F8WFD2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.37■□□□□ 0.85
NPIPA3F8WFD2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPA3F8WFD2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPA3F8WFD2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.36■□□□□ 0.85
NPIPA3F8WFD2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPA3F8WFD2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPA3F8WFD2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPA3F8WFD2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPA3F8WFD2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPA3F8WFD2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.35■□□□□ 0.85
NPIPA3F8WFD2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPIPA3F8WFD2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPIPA3F8WFD2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.35■□□□□ 0.85
NPIPA3F8WFD2 AC006455.2-201ENST00000429931 906 ntBASIC20.35■□□□□ 0.85
NPIPA3F8WFD2 AL138724.1-201ENST00000606771 1088 ntBASIC20.35■□□□□ 0.85
NPIPA3F8WFD2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
NPIPA3F8WFD2 AC011298.3-201ENST00000615796 283 ntBASIC20.35■□□□□ 0.85
NPIPA3F8WFD2 AC009086.3-201ENST00000623486 1008 ntBASIC20.35■□□□□ 0.85
NPIPA3F8WFD2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPIPA3F8WFD2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPIPA3F8WFD2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPIPA3F8WFD2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA3F8WFD2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA3F8WFD2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA3F8WFD2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA3F8WFD2 AC091305.1-201ENST00000479476 895 ntBASIC20.34■□□□□ 0.85
NPIPA3F8WFD2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.34■□□□□ 0.85
NPIPA3F8WFD2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.34■□□□□ 0.85
NPIPA3F8WFD2 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.34■□□□□ 0.85
NPIPA3F8WFD2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.34■□□□□ 0.85
NPIPA3F8WFD2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.34■□□□□ 0.85
NPIPA3F8WFD2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA3F8WFD2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA3F8WFD2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA3F8WFD2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NPIPA3F8WFD2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NPIPA3F8WFD2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPA3F8WFD2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPIPA3F8WFD2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NPIPA3F8WFD2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPIPA3F8WFD2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.33■□□□□ 0.85
NPIPA3F8WFD2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPIPA3F8WFD2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NPIPA3F8WFD2 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.33■□□□□ 0.85
NPIPA3F8WFD2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.33■□□□□ 0.85
NPIPA3F8WFD2 AC008764.7-201ENST00000593779 1081 ntBASIC20.33■□□□□ 0.85
NPIPA3F8WFD2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.33■□□□□ 0.85
NPIPA3F8WFD2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
NPIPA3F8WFD2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPIPA3F8WFD2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPIPA3F8WFD2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NPIPA3F8WFD2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
NPIPA3F8WFD2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 RARRES2P6-201ENST00000567333 442 ntBASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPA3F8WFD2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.31■□□□□ 0.84
NPIPA3F8WFD2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NPIPA3F8WFD2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NPIPA3F8WFD2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPA3F8WFD2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPA3F8WFD2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.31■□□□□ 0.84
NPIPA3F8WFD2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPA3F8WFD2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPA3F8WFD2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPA3F8WFD2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.31■□□□□ 0.84
NPIPA3F8WFD2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPA3F8WFD2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPA3F8WFD2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPA3F8WFD2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPA3F8WFD2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.3■□□□□ 0.84
NPIPA3F8WFD2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.3■□□□□ 0.84
NPIPA3F8WFD2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPA3F8WFD2 AC027682.1-201ENST00000562846 899 ntBASIC20.3■□□□□ 0.84
NPIPA3F8WFD2 CA15P2-201ENST00000611168 834 ntBASIC20.3■□□□□ 0.84
NPIPA3F8WFD2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
NPIPA3F8WFD2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPA3F8WFD2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPA3F8WFD2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPA3F8WFD2 RASA4CP-201ENST00000424092 1398 ntBASIC20.3■□□□□ 0.84
NPIPA3F8WFD2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms