Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPB4C9JG80 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.91■□□□□ 0.78
NPIPB4C9JG80 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
NPIPB4C9JG80 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPB4C9JG80 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPB4C9JG80 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.9■□□□□ 0.78
NPIPB4C9JG80 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.9■□□□□ 0.78
NPIPB4C9JG80 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPB4C9JG80 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.9■□□□□ 0.78
NPIPB4C9JG80 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.9■□□□□ 0.78
NPIPB4C9JG80 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPB4C9JG80 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.9■□□□□ 0.78
NPIPB4C9JG80 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPB4C9JG80 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPB4C9JG80 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPB4C9JG80 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.89■□□□□ 0.77
NPIPB4C9JG80 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.89■□□□□ 0.77
NPIPB4C9JG80 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPB4C9JG80 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.89■□□□□ 0.77
NPIPB4C9JG80 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.89■□□□□ 0.77
NPIPB4C9JG80 DUX4L4-201ENST00000566884 1269 ntBASIC19.89■□□□□ 0.77
NPIPB4C9JG80 MIR6724-1-201ENST00000616420 92 ntBASIC19.89■□□□□ 0.77
NPIPB4C9JG80 MIR6724-2-201ENST00000616483 92 ntBASIC19.89■□□□□ 0.77
NPIPB4C9JG80 MIR6724-4-201ENST00000617390 92 ntBASIC19.89■□□□□ 0.77
NPIPB4C9JG80 MIR6724-3-201ENST00000622482 92 ntBASIC19.89■□□□□ 0.77
NPIPB4C9JG80 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPB4C9JG80 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NPIPB4C9JG80 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPB4C9JG80 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPB4C9JG80 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPB4C9JG80 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPB4C9JG80 AC009102.2-201ENST00000606772 1639 ntBASIC19.88■□□□□ 0.77
NPIPB4C9JG80 ESRRAP2-201ENST00000418437 1549 ntBASIC19.88■□□□□ 0.77
NPIPB4C9JG80 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPB4C9JG80 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPB4C9JG80 TSPY9P-201ENST00000440215 945 ntBASIC19.88■□□□□ 0.77
NPIPB4C9JG80 TSPY11P-201ENST00000442607 1045 ntBASIC19.88■□□□□ 0.77
NPIPB4C9JG80 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.88■□□□□ 0.77
NPIPB4C9JG80 UNC93B8-201ENST00000511903 705 ntBASIC19.88■□□□□ 0.77
NPIPB4C9JG80 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.88■□□□□ 0.77
NPIPB4C9JG80 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.88■□□□□ 0.77
NPIPB4C9JG80 AL035685.1-201ENST00000636663 812 ntBASIC19.88■□□□□ 0.77
NPIPB4C9JG80 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.88■□□□□ 0.77
NPIPB4C9JG80 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NPIPB4C9JG80 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPB4C9JG80 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NPIPB4C9JG80 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPB4C9JG80 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPB4C9JG80 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPB4C9JG80 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPB4C9JG80 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPB4C9JG80 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.87■□□□□ 0.77
NPIPB4C9JG80 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPB4C9JG80 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.87■□□□□ 0.77
NPIPB4C9JG80 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPB4C9JG80 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NPIPB4C9JG80 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPB4C9JG80 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.87■□□□□ 0.77
NPIPB4C9JG80 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NPIPB4C9JG80 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.86■□□□□ 0.77
NPIPB4C9JG80 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
NPIPB4C9JG80 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPB4C9JG80 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.86■□□□□ 0.77
NPIPB4C9JG80 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPB4C9JG80 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.86■□□□□ 0.77
NPIPB4C9JG80 C17orf82-201ENST00000623772 1530 ntBASIC19.86■□□□□ 0.77
NPIPB4C9JG80 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.85■□□□□ 0.77
NPIPB4C9JG80 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
NPIPB4C9JG80 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPB4C9JG80 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NPIPB4C9JG80 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPB4C9JG80 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPB4C9JG80 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPB4C9JG80 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
NPIPB4C9JG80 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPB4C9JG80 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.85■□□□□ 0.77
NPIPB4C9JG80 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.85■□□□□ 0.77
NPIPB4C9JG80 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPB4C9JG80 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPB4C9JG80 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPB4C9JG80 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPB4C9JG80 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.84■□□□□ 0.77
NPIPB4C9JG80 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPB4C9JG80 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.84■□□□□ 0.77
NPIPB4C9JG80 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPB4C9JG80 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPB4C9JG80 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPB4C9JG80 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.84■□□□□ 0.77
NPIPB4C9JG80 AC009086.3-201ENST00000623486 1008 ntBASIC19.84■□□□□ 0.77
NPIPB4C9JG80 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NPIPB4C9JG80 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPB4C9JG80 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.84■□□□□ 0.77
NPIPB4C9JG80 C1orf229-201ENST00000623686 2258 ntBASIC19.83■□□□□ 0.77
NPIPB4C9JG80 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPB4C9JG80 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPB4C9JG80 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
NPIPB4C9JG80 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NPIPB4C9JG80 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPIPB4C9JG80 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
NPIPB4C9JG80 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms