Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
UPK3BL1B0FP48 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.65■■□□□ 1.22
UPK3BL1B0FP48 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UPK3BL1B0FP48 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.65■■□□□ 1.22
UPK3BL1B0FP48 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.65■■□□□ 1.22
UPK3BL1B0FP48 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.65■■□□□ 1.22
UPK3BL1B0FP48 AC093323.1-202ENST00000635031 2045 ntBASIC22.65■■□□□ 1.22
UPK3BL1B0FP48 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
UPK3BL1B0FP48 IRS3P-201ENST00000223076 1006 ntBASIC22.64■■□□□ 1.21
UPK3BL1B0FP48 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UPK3BL1B0FP48 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
UPK3BL1B0FP48 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.64■■□□□ 1.21
UPK3BL1B0FP48 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.64■■□□□ 1.21
UPK3BL1B0FP48 AL138724.1-201ENST00000606771 1088 ntBASIC22.64■■□□□ 1.21
UPK3BL1B0FP48 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.64■■□□□ 1.21
UPK3BL1B0FP48 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UPK3BL1B0FP48 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.64■■□□□ 1.21
UPK3BL1B0FP48 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.63■■□□□ 1.21
UPK3BL1B0FP48 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
UPK3BL1B0FP48 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
UPK3BL1B0FP48 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.63■■□□□ 1.21
UPK3BL1B0FP48 AC099791.2-201ENST00000605725 427 ntBASIC22.63■■□□□ 1.21
UPK3BL1B0FP48 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UPK3BL1B0FP48 ABCB10P4-201ENST00000566803 2184 ntBASIC22.63■■□□□ 1.21
UPK3BL1B0FP48 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
UPK3BL1B0FP48 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
UPK3BL1B0FP48 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UPK3BL1B0FP48 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UPK3BL1B0FP48 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.62■■□□□ 1.21
UPK3BL1B0FP48 AC011298.3-201ENST00000615796 283 ntBASIC22.62■■□□□ 1.21
UPK3BL1B0FP48 AC241377.3-202ENST00000626088 1088 ntBASIC22.62■■□□□ 1.21
UPK3BL1B0FP48 AC241585.3-202ENST00000628937 1088 ntBASIC22.62■■□□□ 1.21
UPK3BL1B0FP48 AC245100.8-202ENST00000629247 1058 ntBASIC22.62■■□□□ 1.21
UPK3BL1B0FP48 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UPK3BL1B0FP48 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.62■■□□□ 1.21
UPK3BL1B0FP48 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UPK3BL1B0FP48 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UPK3BL1B0FP48 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
UPK3BL1B0FP48 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
UPK3BL1B0FP48 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
UPK3BL1B0FP48 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
UPK3BL1B0FP48 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
UPK3BL1B0FP48 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.61■■□□□ 1.21
UPK3BL1B0FP48 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.6■■□□□ 1.21
UPK3BL1B0FP48 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
UPK3BL1B0FP48 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
UPK3BL1B0FP48 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.6■■□□□ 1.21
UPK3BL1B0FP48 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
UPK3BL1B0FP48 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.6■■□□□ 1.21
UPK3BL1B0FP48 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
UPK3BL1B0FP48 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
UPK3BL1B0FP48 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
UPK3BL1B0FP48 SERBP1P1-201ENST00000396021 1160 ntBASIC22.59■■□□□ 1.21
UPK3BL1B0FP48 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
UPK3BL1B0FP48 RARRES2P11-201ENST00000635158 484 ntBASIC22.59■■□□□ 1.21
UPK3BL1B0FP48 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
UPK3BL1B0FP48 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.59■■□□□ 1.21
UPK3BL1B0FP48 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
UPK3BL1B0FP48 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
UPK3BL1B0FP48 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.58■■□□□ 1.21
UPK3BL1B0FP48 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
UPK3BL1B0FP48 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.58■■□□□ 1.21
UPK3BL1B0FP48 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.58■■□□□ 1.21
UPK3BL1B0FP48 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.58■■□□□ 1.21
UPK3BL1B0FP48 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
UPK3BL1B0FP48 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
UPK3BL1B0FP48 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
UPK3BL1B0FP48 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
UPK3BL1B0FP48 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
UPK3BL1B0FP48 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPK3BL1B0FP48 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPK3BL1B0FP48 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
UPK3BL1B0FP48 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.57■■□□□ 1.2
UPK3BL1B0FP48 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPK3BL1B0FP48 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.57■■□□□ 1.2
UPK3BL1B0FP48 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.57■■□□□ 1.2
UPK3BL1B0FP48 AC009086.3-201ENST00000623486 1008 ntBASIC22.57■■□□□ 1.2
UPK3BL1B0FP48 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPK3BL1B0FP48 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
UPK3BL1B0FP48 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPK3BL1B0FP48 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPK3BL1B0FP48 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.56■■□□□ 1.2
UPK3BL1B0FP48 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPK3BL1B0FP48 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
UPK3BL1B0FP48 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UPK3BL1B0FP48 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.56■■□□□ 1.2
UPK3BL1B0FP48 AC006455.2-201ENST00000429931 906 ntBASIC22.56■■□□□ 1.2
UPK3BL1B0FP48 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPK3BL1B0FP48 AC090192.1-201ENST00000517740 490 ntBASIC22.56■■□□□ 1.2
UPK3BL1B0FP48 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.56■■□□□ 1.2
UPK3BL1B0FP48 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.56■■□□□ 1.2
UPK3BL1B0FP48 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPK3BL1B0FP48 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UPK3BL1B0FP48 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPK3BL1B0FP48 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPK3BL1B0FP48 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
UPK3BL1B0FP48 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPK3BL1B0FP48 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
UPK3BL1B0FP48 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
UPK3BL1B0FP48 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms