Protein–RNA interactions for Protein: A6NJU9

NPIPB13, Nuclear pore complex-interacting protein family member B13, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB13A6NJU9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPB13A6NJU9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.91■□□□□ 0.78
NPIPB13A6NJU9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
NPIPB13A6NJU9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPB13A6NJU9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPB13A6NJU9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.9■□□□□ 0.78
NPIPB13A6NJU9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.9■□□□□ 0.78
NPIPB13A6NJU9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPB13A6NJU9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.9■□□□□ 0.78
NPIPB13A6NJU9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.9■□□□□ 0.78
NPIPB13A6NJU9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPB13A6NJU9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.9■□□□□ 0.78
NPIPB13A6NJU9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPB13A6NJU9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPB13A6NJU9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPB13A6NJU9 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.89■□□□□ 0.77
NPIPB13A6NJU9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.89■□□□□ 0.77
NPIPB13A6NJU9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPB13A6NJU9 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.89■□□□□ 0.77
NPIPB13A6NJU9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.89■□□□□ 0.77
NPIPB13A6NJU9 DUX4L4-201ENST00000566884 1269 ntBASIC19.89■□□□□ 0.77
NPIPB13A6NJU9 MIR6724-1-201ENST00000616420 92 ntBASIC19.89■□□□□ 0.77
NPIPB13A6NJU9 MIR6724-2-201ENST00000616483 92 ntBASIC19.89■□□□□ 0.77
NPIPB13A6NJU9 MIR6724-4-201ENST00000617390 92 ntBASIC19.89■□□□□ 0.77
NPIPB13A6NJU9 MIR6724-3-201ENST00000622482 92 ntBASIC19.89■□□□□ 0.77
NPIPB13A6NJU9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPB13A6NJU9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 AC009102.2-201ENST00000606772 1639 ntBASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 ESRRAP2-201ENST00000418437 1549 ntBASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 TSPY9P-201ENST00000440215 945 ntBASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 TSPY11P-201ENST00000442607 1045 ntBASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 UNC93B8-201ENST00000511903 705 ntBASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 AL035685.1-201ENST00000636663 812 ntBASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NPIPB13A6NJU9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPB13A6NJU9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPB13A6NJU9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPB13A6NJU9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPB13A6NJU9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPB13A6NJU9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.87■□□□□ 0.77
NPIPB13A6NJU9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPB13A6NJU9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.87■□□□□ 0.77
NPIPB13A6NJU9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPB13A6NJU9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NPIPB13A6NJU9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPB13A6NJU9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.87■□□□□ 0.77
NPIPB13A6NJU9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NPIPB13A6NJU9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.86■□□□□ 0.77
NPIPB13A6NJU9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
NPIPB13A6NJU9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPB13A6NJU9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.86■□□□□ 0.77
NPIPB13A6NJU9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPB13A6NJU9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.86■□□□□ 0.77
NPIPB13A6NJU9 C17orf82-201ENST00000623772 1530 ntBASIC19.86■□□□□ 0.77
NPIPB13A6NJU9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.85■□□□□ 0.77
NPIPB13A6NJU9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
NPIPB13A6NJU9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPB13A6NJU9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NPIPB13A6NJU9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPB13A6NJU9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPB13A6NJU9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPB13A6NJU9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
NPIPB13A6NJU9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPB13A6NJU9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.85■□□□□ 0.77
NPIPB13A6NJU9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.85■□□□□ 0.77
NPIPB13A6NJU9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPIPB13A6NJU9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPB13A6NJU9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPB13A6NJU9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPB13A6NJU9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.84■□□□□ 0.77
NPIPB13A6NJU9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPB13A6NJU9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.84■□□□□ 0.77
NPIPB13A6NJU9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPB13A6NJU9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPB13A6NJU9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPB13A6NJU9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.84■□□□□ 0.77
NPIPB13A6NJU9 AC009086.3-201ENST00000623486 1008 ntBASIC19.84■□□□□ 0.77
NPIPB13A6NJU9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NPIPB13A6NJU9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPIPB13A6NJU9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.84■□□□□ 0.77
NPIPB13A6NJU9 C1orf229-201ENST00000623686 2258 ntBASIC19.83■□□□□ 0.77
NPIPB13A6NJU9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPB13A6NJU9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPIPB13A6NJU9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
NPIPB13A6NJU9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NPIPB13A6NJU9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPIPB13A6NJU9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
NPIPB13A6NJU9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms