Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 FBXW4P1-201ENST00000426721 2239 ntBASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 PKD1P6-201ENST00000343738 4769 ntBASIC19.74■□□□□ 0.75
TRDV1A0A1B0GX56 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRDV1A0A1B0GX56 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRDV1A0A1B0GX56 AL592295.1-201ENST00000400984 884 ntBASIC19.73■□□□□ 0.75
TRDV1A0A1B0GX56 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRDV1A0A1B0GX56 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRDV1A0A1B0GX56 AC079630.1-202ENST00000618127 1840 ntBASIC19.73■□□□□ 0.75
TRDV1A0A1B0GX56 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRDV1A0A1B0GX56 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRDV1A0A1B0GX56 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRDV1A0A1B0GX56 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.73■□□□□ 0.75
TRDV1A0A1B0GX56 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRDV1A0A1B0GX56 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRDV1A0A1B0GX56 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRDV1A0A1B0GX56 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRDV1A0A1B0GX56 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRDV1A0A1B0GX56 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRDV1A0A1B0GX56 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRDV1A0A1B0GX56 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRDV1A0A1B0GX56 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRDV1A0A1B0GX56 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRDV1A0A1B0GX56 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRDV1A0A1B0GX56 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRDV1A0A1B0GX56 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.72■□□□□ 0.75
TRDV1A0A1B0GX56 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.72■□□□□ 0.75
TRDV1A0A1B0GX56 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRDV1A0A1B0GX56 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRDV1A0A1B0GX56 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRDV1A0A1B0GX56 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRDV1A0A1B0GX56 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRDV1A0A1B0GX56 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.71■□□□□ 0.75
TRDV1A0A1B0GX56 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRDV1A0A1B0GX56 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.71■□□□□ 0.75
TRDV1A0A1B0GX56 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRDV1A0A1B0GX56 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRDV1A0A1B0GX56 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.71■□□□□ 0.75
TRDV1A0A1B0GX56 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRDV1A0A1B0GX56 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRDV1A0A1B0GX56 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRDV1A0A1B0GX56 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRDV1A0A1B0GX56 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRDV1A0A1B0GX56 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRDV1A0A1B0GX56 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.7■□□□□ 0.74
TRDV1A0A1B0GX56 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRDV1A0A1B0GX56 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRDV1A0A1B0GX56 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRDV1A0A1B0GX56 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TRDV1A0A1B0GX56 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRDV1A0A1B0GX56 RPS2P7-201ENST00000447334 885 ntBASIC19.69■□□□□ 0.74
TRDV1A0A1B0GX56 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.69■□□□□ 0.74
TRDV1A0A1B0GX56 AC080038.3-201ENST00000623346 1952 ntBASIC19.69■□□□□ 0.74
TRDV1A0A1B0GX56 AC131274.2-201ENST00000580697 1507 ntBASIC19.69■□□□□ 0.74
TRDV1A0A1B0GX56 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRDV1A0A1B0GX56 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRDV1A0A1B0GX56 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRDV1A0A1B0GX56 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRDV1A0A1B0GX56 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRDV1A0A1B0GX56 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRDV1A0A1B0GX56 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.68■□□□□ 0.74
TRDV1A0A1B0GX56 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRDV1A0A1B0GX56 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRDV1A0A1B0GX56 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRDV1A0A1B0GX56 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRDV1A0A1B0GX56 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRDV1A0A1B0GX56 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRDV1A0A1B0GX56 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRDV1A0A1B0GX56 AC022413.1-201ENST00000624602 984 ntBASIC19.68■□□□□ 0.74
TRDV1A0A1B0GX56 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.68■□□□□ 0.74
TRDV1A0A1B0GX56 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRDV1A0A1B0GX56 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRDV1A0A1B0GX56 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRDV1A0A1B0GX56 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
TRDV1A0A1B0GX56 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.67■□□□□ 0.74
TRDV1A0A1B0GX56 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRDV1A0A1B0GX56 SLC25A24-204ENST00000569674 2357 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms