Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV21A0A0B4J279 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV21A0A0B4J279 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV21A0A0B4J279 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV21A0A0B4J279 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV21A0A0B4J279 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV21A0A0B4J279 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV21A0A0B4J279 DUX4L18-201ENST00000553347 1267 ntBASIC16.61■□□□□ 0.25
TRAV21A0A0B4J279 AC074183.2-201ENST00000623112 922 ntBASIC16.61■□□□□ 0.25
TRAV21A0A0B4J279 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV21A0A0B4J279 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRAV21A0A0B4J279 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV21A0A0B4J279 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV21A0A0B4J279 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV21A0A0B4J279 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV21A0A0B4J279 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 ESRRAP2-201ENST00000418437 1549 ntBASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 ABHD17AP5-201ENST00000580133 923 ntBASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 THA1P-201ENST00000590384 1145 ntBASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV21A0A0B4J279 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV21A0A0B4J279 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV21A0A0B4J279 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRAV21A0A0B4J279 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRAV21A0A0B4J279 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRAV21A0A0B4J279 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV21A0A0B4J279 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.59■□□□□ 0.25
TRAV21A0A0B4J279 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV21A0A0B4J279 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV21A0A0B4J279 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV21A0A0B4J279 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRAV21A0A0B4J279 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV21A0A0B4J279 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV21A0A0B4J279 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV21A0A0B4J279 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV21A0A0B4J279 LINC00526-201ENST00000581067 1875 ntBASIC16.59■□□□□ 0.25
TRAV21A0A0B4J279 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV21A0A0B4J279 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TRAV21A0A0B4J279 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV21A0A0B4J279 EP400NL-214ENST00000641289 2402 ntBASIC16.58■□□□□ 0.25
TRAV21A0A0B4J279 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV21A0A0B4J279 KRT18P24-201ENST00000344739 1156 ntBASIC16.58■□□□□ 0.24
TRAV21A0A0B4J279 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRAV21A0A0B4J279 NTF6A-201ENST00000591175 560 ntBASIC16.58■□□□□ 0.24
TRAV21A0A0B4J279 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV21A0A0B4J279 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV21A0A0B4J279 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV21A0A0B4J279 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV21A0A0B4J279 ECEL1P1-201ENST00000373592 1742 ntBASIC16.58■□□□□ 0.24
TRAV21A0A0B4J279 AC127496.7-201ENST00000625110 1798 ntBASIC16.58■□□□□ 0.24
TRAV21A0A0B4J279 AC079630.1-202ENST00000618127 1840 ntBASIC16.58■□□□□ 0.24
TRAV21A0A0B4J279 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV21A0A0B4J279 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV21A0A0B4J279 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRAV21A0A0B4J279 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV21A0A0B4J279 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 AC004448.1-201ENST00000458332 883 ntBASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 MIR4281-201ENST00000580852 62 ntBASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV21A0A0B4J279 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TRAV21A0A0B4J279 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV21A0A0B4J279 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV21A0A0B4J279 AF131216.4-201ENST00000638924 1588 ntBASIC16.56■□□□□ 0.24
TRAV21A0A0B4J279 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV21A0A0B4J279 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV21A0A0B4J279 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV21A0A0B4J279 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV21A0A0B4J279 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV21A0A0B4J279 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV21A0A0B4J279 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV21A0A0B4J279 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV21A0A0B4J279 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV21A0A0B4J279 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms