Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRAV22A0A0B4J277 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC12.71□□□□□ -0.37
TRAV22A0A0B4J277 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TRAV22A0A0B4J277 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TRAV22A0A0B4J277 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV22A0A0B4J277 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV22A0A0B4J277 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV22A0A0B4J277 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
TRAV22A0A0B4J277 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV22A0A0B4J277 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV22A0A0B4J277 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.71□□□□□ -0.37
TRAV22A0A0B4J277 CALM3-209ENST00000597743 577 ntTSL 4 BASIC12.71□□□□□ -0.37
TRAV22A0A0B4J277 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TRAV22A0A0B4J277 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV22A0A0B4J277 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TRAV22A0A0B4J277 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TRAV22A0A0B4J277 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TRAV22A0A0B4J277 HLA-L-211ENST00000482052 1765 ntBASIC12.71□□□□□ -0.38
TRAV22A0A0B4J277 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC12.71□□□□□ -0.38
TRAV22A0A0B4J277 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV22A0A0B4J277 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV22A0A0B4J277 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC12.71□□□□□ -0.38
TRAV22A0A0B4J277 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
TRAV22A0A0B4J277 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TRAV22A0A0B4J277 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC12.71□□□□□ -0.38
TRAV22A0A0B4J277 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 AL391121.1-201ENST00000607967 1349 ntBASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TRAV22A0A0B4J277 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAV22A0A0B4J277 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV22A0A0B4J277 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV22A0A0B4J277 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV22A0A0B4J277 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TRAV22A0A0B4J277 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV22A0A0B4J277 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV22A0A0B4J277 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TRAV22A0A0B4J277 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV22A0A0B4J277 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAV22A0A0B4J277 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV22A0A0B4J277 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV22A0A0B4J277 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV22A0A0B4J277 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV22A0A0B4J277 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms