Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV18A0A075B6X5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV18A0A075B6X5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRAV18A0A075B6X5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV18A0A075B6X5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.24■□□□□ 0.67
TRAV18A0A075B6X5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV18A0A075B6X5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV18A0A075B6X5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV18A0A075B6X5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV18A0A075B6X5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV18A0A075B6X5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV18A0A075B6X5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV18A0A075B6X5 ALDH1A3-203ENST00000557963 1670 ntBASIC19.24■□□□□ 0.67
TRAV18A0A075B6X5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV18A0A075B6X5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV18A0A075B6X5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV18A0A075B6X5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV18A0A075B6X5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV18A0A075B6X5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRAV18A0A075B6X5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV18A0A075B6X5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV18A0A075B6X5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV18A0A075B6X5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV18A0A075B6X5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV18A0A075B6X5 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRAV18A0A075B6X5 AL137060.1-201ENST00000618151 2648 ntBASIC19.23■□□□□ 0.67
TRAV18A0A075B6X5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV18A0A075B6X5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV18A0A075B6X5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV18A0A075B6X5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV18A0A075B6X5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV18A0A075B6X5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRAV18A0A075B6X5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.22■□□□□ 0.67
TRAV18A0A075B6X5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TRAV18A0A075B6X5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV18A0A075B6X5 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV18A0A075B6X5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV18A0A075B6X5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
TRAV18A0A075B6X5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV18A0A075B6X5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV18A0A075B6X5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV18A0A075B6X5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV18A0A075B6X5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV18A0A075B6X5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV18A0A075B6X5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV18A0A075B6X5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV18A0A075B6X5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV18A0A075B6X5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV18A0A075B6X5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
TRAV18A0A075B6X5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 AC009831.1-201ENST00000580420 1582 ntBASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 AL024507.2-201ENST00000606070 2574 ntBASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 AC133552.2-201ENST00000619106 1032 ntBASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV18A0A075B6X5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
TRAV18A0A075B6X5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV18A0A075B6X5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAV18A0A075B6X5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV18A0A075B6X5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV18A0A075B6X5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRAV18A0A075B6X5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRAV18A0A075B6X5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRAV18A0A075B6X5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.19■□□□□ 0.66
TRAV18A0A075B6X5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV18A0A075B6X5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRAV18A0A075B6X5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV18A0A075B6X5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV18A0A075B6X5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV18A0A075B6X5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV18A0A075B6X5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV18A0A075B6X5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.18■□□□□ 0.66
TRAV18A0A075B6X5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV18A0A075B6X5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRAV18A0A075B6X5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV18A0A075B6X5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRAV18A0A075B6X5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRAV18A0A075B6X5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV18A0A075B6X5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV18A0A075B6X5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV18A0A075B6X5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV18A0A075B6X5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV18A0A075B6X5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV18A0A075B6X5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV18A0A075B6X5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV18A0A075B6X5 MIR639-201ENST00000384974 98 ntBASIC19.17■□□□□ 0.66
TRAV18A0A075B6X5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.17■□□□□ 0.66
TRAV18A0A075B6X5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV18A0A075B6X5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms