Protein–RNA interactions for Protein: W4VSP8

Vmn1r10, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r10W4VSP8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Vmn1r10W4VSP8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.44■■□□□ 1.5
Vmn1r10W4VSP8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Vmn1r10W4VSP8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Vmn1r10W4VSP8 Zfp131-205ENSMUST00000223812 663 ntBASIC24.4■■□□□ 1.5
Vmn1r10W4VSP8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Vmn1r10W4VSP8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Vmn1r10W4VSP8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Vmn1r10W4VSP8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Vmn1r10W4VSP8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Vmn1r10W4VSP8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Vmn1r10W4VSP8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Vmn1r10W4VSP8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.28■■□□□ 1.48
Vmn1r10W4VSP8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Vmn1r10W4VSP8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Vmn1r10W4VSP8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Vmn1r10W4VSP8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Vmn1r10W4VSP8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Vmn1r10W4VSP8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Vmn1r10W4VSP8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.18■■□□□ 1.46
Vmn1r10W4VSP8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Vmn1r10W4VSP8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Vmn1r10W4VSP8 Gm16148-201ENSMUST00000119653 893 ntBASIC24.16■■□□□ 1.46
Vmn1r10W4VSP8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Vmn1r10W4VSP8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Vmn1r10W4VSP8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Vmn1r10W4VSP8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Vmn1r10W4VSP8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Vmn1r10W4VSP8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Vmn1r10W4VSP8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Vmn1r10W4VSP8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Vmn1r10W4VSP8 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.09■■□□□ 1.45
Vmn1r10W4VSP8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Vmn1r10W4VSP8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
Vmn1r10W4VSP8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Vmn1r10W4VSP8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Vmn1r10W4VSP8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Vmn1r10W4VSP8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Vmn1r10W4VSP8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Vmn1r10W4VSP8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Vmn1r10W4VSP8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vmn1r10W4VSP8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Vmn1r10W4VSP8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Vmn1r10W4VSP8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24■■□□□ 1.43
Vmn1r10W4VSP8 Mipep-204ENSMUST00000225043 1548 ntBASIC24■■□□□ 1.43
Vmn1r10W4VSP8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Vmn1r10W4VSP8 Peli2-204ENSMUST00000226513 1320 ntBASIC24■■□□□ 1.43
Vmn1r10W4VSP8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Vmn1r10W4VSP8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Vmn1r10W4VSP8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Vmn1r10W4VSP8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Vmn1r10W4VSP8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Vmn1r10W4VSP8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Vmn1r10W4VSP8 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.93■■□□□ 1.42
Vmn1r10W4VSP8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
Vmn1r10W4VSP8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.91■■□□□ 1.42
Vmn1r10W4VSP8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
Vmn1r10W4VSP8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Vmn1r10W4VSP8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.91■■□□□ 1.42
Vmn1r10W4VSP8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Vmn1r10W4VSP8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vmn1r10W4VSP8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vmn1r10W4VSP8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.86■■□□□ 1.41
Vmn1r10W4VSP8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Vmn1r10W4VSP8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.85■■□□□ 1.41
Vmn1r10W4VSP8 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.85■■□□□ 1.41
Vmn1r10W4VSP8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Vmn1r10W4VSP8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vmn1r10W4VSP8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vmn1r10W4VSP8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Vmn1r10W4VSP8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vmn1r10W4VSP8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vmn1r10W4VSP8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vmn1r10W4VSP8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.81■■□□□ 1.4
Vmn1r10W4VSP8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vmn1r10W4VSP8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.79■■□□□ 1.4
Vmn1r10W4VSP8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Vmn1r10W4VSP8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vmn1r10W4VSP8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vmn1r10W4VSP8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.74■■□□□ 1.39
Vmn1r10W4VSP8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
Vmn1r10W4VSP8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vmn1r10W4VSP8 Zxda-201ENSMUST00000117281 2621 ntBASIC23.72■■□□□ 1.39
Vmn1r10W4VSP8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vmn1r10W4VSP8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Vmn1r10W4VSP8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.7■■□□□ 1.38
Vmn1r10W4VSP8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Vmn1r10W4VSP8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Vmn1r10W4VSP8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Vmn1r10W4VSP8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Vmn1r10W4VSP8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Vmn1r10W4VSP8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.65■■□□□ 1.38
Vmn1r10W4VSP8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vmn1r10W4VSP8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.63■■□□□ 1.37
Vmn1r10W4VSP8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Vmn1r10W4VSP8 Gm45855-201ENSMUST00000212546 880 ntBASIC23.62■■□□□ 1.37
Vmn1r10W4VSP8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Vmn1r10W4VSP8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Vmn1r10W4VSP8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Vmn1r10W4VSP8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms